基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA05G418710 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr05:104311836-104312974 (+) |
| 描述 | Similar to At5g61620: Probable transcription factor At5g61620 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_021757 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 22 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g61620 |
可能参与体细胞胚胎发生的转录因子。 | |
At5g47390 |
转录阻遏蛋白。 |
A novel Arabidopsis MYB-like transcription factor, MYBH, regulates hypocotyl elongation by enhancing auxin accumulation.2013 · DOI: 10.1093/jxb/ert223
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os10g0561400 |
与基因启动子中的 5'-TATCCA-3' 元件结合的转录阻遏蛋白。 | |
UniProt: B8BI93 |
与基因启动子中的 5'-TATCCA-3' 元件结合的转录激活剂。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=55.208; 覆盖度=42.857; E 值=1.48e-26; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.25; 覆盖度=42.857; E 值=2.22e-29; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.25; 覆盖度=42.857; E 值=2.22e-29; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009646 | response to absence of light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.732; 覆盖度=43.304; E 值=5.81e-29; UniProt GO evidence=IEA:EnsemblPlants | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009723 | response to ethylene | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.25; 覆盖度=42.857; E 值=2.22e-29; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.732; 覆盖度=43.304; E 值=5.81e-29; UniProt GO evidence=IEA:EnsemblPlants | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009739 | response to gibberellin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.25; 覆盖度=42.857; E 值=2.22e-29; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009744 | response to sucrose | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.732; 覆盖度=43.304; E 值=5.81e-29; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010150 | leaf senescence | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.732; 覆盖度=43.304; E 值=5.81e-29; UniProt GO evidence=IEA:EnsemblPlants | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030307 | positive regulation of cell growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=55.208; 覆盖度=42.857; E 值=1.48e-26; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.732; 覆盖度=43.304; E 值=5.81e-29; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=56.044; 覆盖度=40.625; E 值=3.17e-27; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048366 | leaf development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=55.208; 覆盖度=42.857; E 值=1.48e-26; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048527 | lateral root development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.732; 覆盖度=43.304; E 值=5.81e-29; UniProt GO evidence=IEA:EnsemblPlants | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090697 | post-embryonic plant organ morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.732; 覆盖度=43.304; E 值=5.81e-29; UniProt GO evidence=IEA:EnsemblPlants | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140964 | intracellular auxin homeostasis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.732; 覆盖度=43.304; E 值=5.81e-29; UniProt GO evidence=IEA:EnsemblPlants | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000377 | regulation of reactive oxygen species metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=55.208; 覆盖度=42.857; E 值=1.48e-26; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.25; 覆盖度=42.857; E 值=2.22e-29; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.732; 覆盖度=43.304; E 值=5.81e-29; UniProt GO evidence=IEA:EnsemblPlants | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.25; 覆盖度=42.857; E 值=2.22e-29; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.25; 覆盖度=42.857; E 值=2.22e-29; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.25; 覆盖度=42.857; E 值=2.22e-29; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G47390 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=55.208; 覆盖度=42.857; E 值=1.48e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G61620 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.25; 覆盖度=42.857; E 值=2.22e-29 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os10g0562100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=56.044; 覆盖度=40.625; E 值=3.17e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4349391 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=56.044; 覆盖度=40.625; E 值=3.17e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release |