基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA05G025860 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr05:7038288-7040875 (+) |
| 描述 | Similar to VIP2: Probable NOT transcription complex subunit VIP2 (Fragment) (Nicotiana benthamiana OX%3D4100) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_036479 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释；下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 25 条 GO 注释和 3 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g21180 |
这种依赖镁的酶催化ATP水解，并伴随钙离子从胞质转运出细胞或进入细胞器。 | 暂无已核实直接文献 |
At5g59710 |
农杆菌介导的通过 T-DNA 整合到宿主基因组中的稳定遗传转化所需的转录调节因子，但不是 T-DNA 瞬时表达所需的转录调节因子。 | 暂无已核实直接文献 |
At4g29900 |
这种镁依赖性酶催化ATP的水解，同时将钙从胞质转运到内质网。 | 暂无已核实直接文献 |
At3g24430 |
光系统 I 生物合成和组装所需。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os04g0605500 |
这种依赖镁的酶催化 ATP 水解，并伴随钙从细胞质外运入内质网或细胞器（通过相似性）。 | 暂无已核实直接文献 |
Os01g0719700 |
光系统 I (PSI) 生物合成和组装所需。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=59.549; 覆盖度=100.91; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.313; 覆盖度=93.171; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.313; 覆盖度=93.171; E 值=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006417 | regulation of translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010606 | positive regulation of cytoplasmic mRNA processing body assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015074 | DNA integration | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.313; 覆盖度=93.171; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031047 | regulatory ncRNA-mediated gene silencing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033147 | negative regulation of intracellular estrogen receptor signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000036 | regulation of stem cell population maintenance | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000932 | P-body | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=59.549; 覆盖度=100.91; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.313; 覆盖度=93.171; E 值=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=45.304; 覆盖度=27.466; E 值=7.5e-38; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=45.304; 覆盖度=27.466; E 值=7.5e-38; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=59.549; 覆盖度=100.91; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030014 | CCR4-NOT complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030015 | CCR4-NOT core complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.313; 覆盖度=93.171; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001222 | transcription corepressor binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003712 | transcription coregulator activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=59.549; 覆盖度=100.91; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004535 | poly(A)-specific ribonuclease activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=45.304; 覆盖度=27.466; E 值=7.5e-38; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G59710 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=59.549; 覆盖度=100.91; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:4848 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=45.304; 覆盖度=27.466; E 值=5.31e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:72068 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=45.304; 覆盖度=27.466; E 值=7.5e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release |