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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA03G442050
Query referenceTK1151
LocationChr03:110163633-110167118 (-)
DescriptionSimilar to NBR1: Protein NBR1 homolog (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009495 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 25 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g24690 Autophagic substrate degraded in the vacuole by non-selective autophagy.
Plant NBR1 is a selective autophagy substrate and a functional hybrid of the mammalian autophagic adapters NBR1 and p62/SQSTM1.2011 · DOI: 10.4161/auto.7.9.16389
NBR1-mediated selective autophagy targets insoluble ubiquitinated protein aggregates in plant stress responses.2013 · DOI: 10.1371/journal.pgen.1003196
E3 ubiquitin ligase CHIP and NBR1-mediated selective autophagy protect additively against proteotoxicity in plant stress responses.2014 · DOI: 10.1371/journal.pgen.1004116

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006914autophagyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.753; coverage=65.276; evalue=5.43e-143; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015031protein transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.753; coverage=65.276; evalue=5.43e-143; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016236macroautophagyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.175; coverage=28.398; evalue=3.7e-19; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032480negative regulation of type I interferon productionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.534; coverage=17.631; evalue=5.99e-14; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032720negative regulation of tumor necrosis factor productionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.534; coverage=17.631; evalue=5.99e-14; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045087innate immune responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.534; coverage=17.631; evalue=5.99e-14; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050687negative regulation of defense response to virusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.534; coverage=17.631; evalue=5.99e-14; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050832defense response to fungusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.753; coverage=65.276; evalue=5.43e-143; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051258protein polymerizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.784; coverage=102.961; evalue=1.42e-160; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071211protein targeting to vacuole involved in autophagyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.784; coverage=102.961; evalue=1.42e-160; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1900181negative regulation of protein localization to nucleusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.534; coverage=17.631; evalue=5.99e-14; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000407phagophore assembly siteCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.175; coverage=28.398; evalue=3.7e-19; UniProt GO evidence=IEA:TreeGrafterUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.784; coverage=102.961; evalue=1.42e-160; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005764lysosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.175; coverage=28.398; evalue=3.7e-19; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005770late endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.175; coverage=28.398; evalue=3.7e-19; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005773vacuoleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.784; coverage=102.961; evalue=1.42e-160; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005776autophagosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.784; coverage=102.961; evalue=1.42e-160; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005778peroxisomal membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.175; coverage=28.398; evalue=3.7e-19; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.175; coverage=28.398; evalue=3.7e-19; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016607nuclear speckCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.534; coverage=17.631; evalue=5.99e-14; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031410cytoplasmic vesicleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.753; coverage=65.276; evalue=5.43e-143; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043235receptor complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.175; coverage=28.398; evalue=3.7e-19; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070013intracellular organelle lumenCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.175; coverage=28.398; evalue=3.7e-19; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.784; coverage=102.961; evalue=1.42e-160; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043130ubiquitin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.784; coverage=102.961; evalue=1.42e-160; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G24690KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.784; coverage=102.961; evalue=1.42e-160UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGgga:419902KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.534; coverage=17.631; evalue=5.99e-14UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGpon:100174370KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.175; coverage=28.398; evalue=3.7e-19UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGsot:102582603KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.753; coverage=65.276; evalue=5.43e-143UniProtKB/Swiss-Prot DAT 2026 current_release