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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA01G373590
Query referenceTK1151
LocationChr01:93212415-93215236 (+)
DescriptionSimilar to PCMP-H28: Pentatricopeptide repeat-containing protein At4g21065 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_021074 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g57090 Component of the peroxisomal and mitochondrial division machineries.
BIGYIN, an orthologue of human and yeast FIS1 genes functions in the control of mitochondrial size and number in Arabidopsis thaliana.2006 · DOI: 10.1093/jxb/erj096
Two small protein families, DYNAMIN-RELATED PROTEIN3 and FISSION1, are required for peroxisome fission in Arabidopsis.2009 · DOI: 10.1111/j.1365-313x.2008.03677.x
FISSION1A and FISSION1B proteins mediate the fission of peroxisomes and mitochondria in Arabidopsis.2008 · DOI: 10.1093/mp/ssn056
At5g12390 Component of the peroxisomal and mitochondrial division machineries.
Arabidopsis PEROXIN11c-e, FISSION1b, and DYNAMIN-RELATED PROTEIN3A cooperate in cell cycle-associated replication of peroxisomes.2008 · DOI: 10.1105/tpc.107.057679
Two small protein families, DYNAMIN-RELATED PROTEIN3 and FISSION1, are required for peroxisome fission in Arabidopsis.2009 · DOI: 10.1111/j.1365-313x.2008.03677.x
FISSION1A and FISSION1B proteins mediate the fission of peroxisomes and mitochondria in Arabidopsis.2008 · DOI: 10.1093/mp/ssn056

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006397mRNA processingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.53; coverage=75.569; evalue=1.5e-86; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009451RNA modificationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.362; coverage=73.748; evalue=2.08e-88; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016554cytidine to uridine editingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.814; coverage=78.3; evalue=3.28e-81; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016556mRNA modificationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.53; coverage=75.569; evalue=1.5e-86; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031425chloroplast RNA processingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.753; coverage=73.596; evalue=1.84e-83; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1900865chloroplast RNA modificationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.814; coverage=78.3; evalue=3.28e-81; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.362; coverage=73.748; evalue=2.08e-88; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.362; coverage=73.748; evalue=2.08e-88; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.362; coverage=73.748; evalue=2.08e-88; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003729mRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.648; coverage=81.032; evalue=1.93e-84; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004519endonuclease activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.53; coverage=75.569; evalue=1.5e-86; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.362; coverage=73.748; evalue=2.08e-88; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G59720KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.53; coverage=75.569; evalue=1.5e-86UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G02980KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.753; coverage=73.596; evalue=1.84e-83UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G21065KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.362; coverage=73.748; evalue=2.08e-88UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G48910KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.648; coverage=81.032; evalue=1.93e-84UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G66520KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.814; coverage=78.3; evalue=3.28e-81UniProtKB/Swiss-Prot DAT 2026 current_release