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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_039106
Query referenceOH1004
LocationChr09:59349556-59352873 (-)
DescriptionSimilar to OVA7: Serine--tRNA ligase%2C chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_039106 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 13 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g11870 Catalyzes the attachment of serine to tRNA(Ser). No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006434seryl-tRNA aminoacylationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.0; coverage=80.451; evalue=4.67e-144; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007005mitochondrion organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.233; coverage=96.053; evalue=0.0; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009658chloroplast organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.233; coverage=96.053; evalue=0.0; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016260L-selenocysteine biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.0; coverage=80.451; evalue=4.67e-144; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048481plant ovule developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.233; coverage=96.053; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070158mitochondrial seryl-tRNA aminoacylationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.233; coverage=96.053; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.233; coverage=96.053; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.233; coverage=96.053; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.233; coverage=96.053; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.233; coverage=96.053; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000049tRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.233; coverage=96.053; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004828serine-tRNA ligase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.233; coverage=96.053; evalue=0.0; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.233; coverage=96.053; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G11870KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.233; coverage=96.053; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbaf:BAPKO_0234KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.581; coverage=80.827; evalue=1.66e-132UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbafz:BafPKo_0228KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.581; coverage=80.827; evalue=1.66e-132UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbga:BG0229KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.349; coverage=80.827; evalue=8.49e-134UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGrxy:Rxyl_1086KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.183; coverage=80.075; evalue=3.91e-139UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGtde:TDE_2307KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.0; coverage=80.451; evalue=4.67e-144UniProtKB/Swiss-Prot DAT 2026 current_release