基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_035351 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr08:20859113-20861004 (-) |
| 描述 | Similar to SIGA: RNA polymerase sigma factor sigA (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_035351 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 16 条 GO 注释和 6 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g64860 |
必需蛋白质。 | 暂无已核实直接文献 |
At1g08540 |
通过在光照条件下协调核基因组和叶绿体基因组，促进质体向叶绿体的转变所必需。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os08g0163400 |
Sigma 因子是起始因子，促进质体编码 RNA 聚合酶（PEP）附着到特定起始位点，然后被释放（推测）。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006352 | DNA-templated transcription initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.754; 覆盖度=109.091; E 值=1.18e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.754; 覆盖度=109.091; E 值=1.18e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006399 | tRNA metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.43; 覆盖度=65.368; E 值=1.57e-46; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009658 | chloroplast organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.43; 覆盖度=65.368; E 值=1.57e-46; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010114 | response to red light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.43; 覆盖度=65.368; E 值=1.57e-46; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071461 | cellular response to redox state | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.754; 覆盖度=109.091; E 值=1.18e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071482 | cellular response to light stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.754; 覆盖度=109.091; E 值=1.18e-176; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080005 | photosystem stoichiometry adjustment | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.754; 覆盖度=109.091; E 值=1.18e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001141 | regulation of RNA biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.754; 覆盖度=109.091; E 值=1.18e-176; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.561; 覆盖度=65.152; E 值=5.98e-44; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.754; 覆盖度=109.091; E 值=1.18e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903865 | sigma factor antagonist complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.754; 覆盖度=109.091; E 值=1.18e-176; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.754; 覆盖度=109.091; E 值=1.18e-176; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.561; 覆盖度=65.152; E 值=5.98e-44; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003899 | DNA-directed RNA polymerase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.754; 覆盖度=109.091; E 值=1.18e-176; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016987 | sigma factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.754; 覆盖度=109.091; E 值=1.18e-176; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ana:all5263 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.766; 覆盖度=66.667; E 值=4.63e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G08540 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=35.43; 覆盖度=65.368; E 值=1.57e-46 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G64860 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.754; 覆盖度=109.091; E 值=1.18e-176 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os08g0163400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=53.79; 覆盖度=88.528; E 值=2.62e-134 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4344738 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=53.79; 覆盖度=88.528; E 值=2.62e-134 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syf:Synpcc7942_0672 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.561; 覆盖度=65.152; E 值=5.98e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release |