基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

基因 ID	`LXL04_026202`
当前查询版本	OH1004
位置	Chr05:122691961-122695987 (+)
描述	Similar to CLSY3: SNF2 domain-containing protein CLASSY 3 (Arabidopsis thaliana OX%3D3702)
注释来源组装	GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_026202 · GCA_047496595.1_OSU_TarKok_2.0。

当前查询返回来自 OH1004 注释条目的 21 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID	可能功能	对应论文 / DOI
`At1g05490`	可能的染色质重塑因子。	暂无已核实直接文献
`At3g24340`	可能的染色质重塑因子。	暂无已核实直接文献
`At5g20420`	可能的染色质重塑因子。	暂无已核实直接文献
`At3g42670`	可能的染色质重塑因子。	Identification of genes required for de novo DNA methylation in Arabidopsis.2011 · DOI: 10.4161/epi.6.3.14242
`At2g16390`	染色质重塑复合物的亚基，介导 RNA 聚合酶 IV 和 V招募至染色质。	Atypical RNA polymerase subunits required for RNA-directed DNA methylation.2005 · DOI: 10.1038/ng1580 A SNF2-like protein facilitates dynamic control of DNA methylation.2005 · DOI: 10.1038/sj.embor.7400446 Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis.2006 · DOI: 10.1038/sj.emboj.7601150 RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in arabidopsis.2006 · DOI: 10.1371/journal.pgen.0020083 A structural-maintenance-of-chromosomes hinge domain-containing protein is required for RNA-directed DNA methylation.2008 · DOI: 10.1038/ng.119 Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes.2008 · DOI: 10.1016/j.cell.2008.09.035 NRPD4, a protein related to the RPB4 subunit of RNA polymerase II, is a component of RNA polymerases IV and V and is required for RNA-directed DNA methylation.2009 · DOI: 10.1101/gad.1765209 Defining the functional network of epigenetic regulators in Arabidopsis thaliana.2009 · DOI: 10.1093/mp/ssp017 RNA polymerase V functions in Arabidopsis interphase heterochromatin organization independently of the 24-nt siRNA-directed DNA methylation pathway.2009 · DOI: 10.1093/mp/ssp006 The RNA silencing enzyme RNA polymerase v is required for plant immunity.2011 · DOI: 10.1371/journal.pgen.1002434 RNA polymerase V-dependent small RNAs in Arabidopsis originate from small, intergenic loci including most SINE repeats.2012 · DOI: 10.4161/epi.20290 The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin.2013 · DOI: 10.1016/j.cell.2013.02.033

水稻

当前来源表未检出该物种的同源命中。

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型	ID	名称	命名空间	证据	来源
GO	GO:0001059	transcription by RNA polymerase IV	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=45.884; 覆盖度=58.763; E 值=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006346	DNA methylation-dependent constitutive heterochromatin formation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.56; 覆盖度=49.564; E 值=6.28e-80; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031047	regulatory ncRNA-mediated gene silencing	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.975; 覆盖度=59.397; E 值=4.27e-93; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0035563	positive regulation of chromatin binding	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.56; 覆盖度=49.564; E 值=6.28e-80; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0040029	epigenetic regulation of gene expression	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.56; 覆盖度=49.564; E 值=6.28e-80; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050832	defense response to fungus	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.56; 覆盖度=49.564; E 值=6.28e-80; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0070828	heterochromatin organization	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.56; 覆盖度=49.564; E 值=6.28e-80; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071360	cellular response to exogenous dsRNA	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.56; 覆盖度=49.564; E 值=6.28e-80; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080188	gene silencing by siRNA-directed DNA methylation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=45.884; 覆盖度=58.763; E 值=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0140745	siRNA transcription	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.49; 覆盖度=58.604; E 值=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000419	RNA polymerase V complex	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.56; 覆盖度=49.564; E 值=6.28e-80; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=45.884; 覆盖度=58.763; E 值=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005654	nucleoplasm	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.975; 覆盖度=59.397; E 值=4.27e-93; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005721	pericentric heterochromatin	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.56; 覆盖度=49.564; E 值=6.28e-80; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005730	nucleolus	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.975; 覆盖度=59.397; E 值=4.27e-93; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090577	RNA polymerase IV transcription regulator complex	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.56; 覆盖度=49.564; E 值=6.28e-80; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=45.884; 覆盖度=58.763; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003682	chromatin binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.975; 覆盖度=59.397; E 值=4.27e-93; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004386	helicase activity	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=45.884; 覆盖度=58.763; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005524	ATP binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=45.884; 覆盖度=58.763; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016787	hydrolase activity	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=45.884; 覆盖度=58.763; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G05490	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=45.884; 覆盖度=58.763; E 值=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G16390	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.56; 覆盖度=49.564; E 值=6.28e-80	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G24340	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.49; 覆盖度=58.604; E 值=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G42670	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.975; 覆盖度=59.397; E 值=4.27e-93	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G20420	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=32.749; 覆盖度=58.842; E 值=4.8e-97	UniProtKB/Swiss-Prot DAT 2026 current_release