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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_026119
Query referenceOH1004
LocationChr05:121236124-121239636 (+)
DescriptionSimilar to CSLD3: Cellulose synthase-like protein D3 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_026119 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g03050 Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
AtCSLD3, a cellulose synthase-like gene important for root hair growth in arabidopsis.2001 · DOI: 10.1104/pp.126.2.575
At5g16910 Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: A2YU42 Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall. No verified direct reference in this release
Os06g0111800 Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall. No verified direct reference in this release
Os10g0578200 Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
OsCSLD1, a cellulose synthase-like D1 gene, is required for root hair morphogenesis in rice.2007 · DOI: 10.1104/pp.106.091546

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009409response to coldBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.878; coverage=100.437; evalue=0.0; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009833plant-type primary cell wall biogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.878; coverage=100.437; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030244cellulose biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.878; coverage=100.437; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048767root hair elongationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=79.947; coverage=99.038; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071555cell wall organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.878; coverage=100.437; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071669plant-type cell wall organization or biogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=80.209; coverage=100.35; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000139Golgi membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.878; coverage=100.437; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005768endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.878; coverage=100.437; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.878; coverage=100.437; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.878; coverage=100.437; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005802trans-Golgi networkCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.878; coverage=100.437; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.878; coverage=100.437; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016760cellulose synthase (UDP-forming) activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.878; coverage=100.437; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051753mannan synthase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.878; coverage=100.437; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G03050KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.878; coverage=100.437; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G16910KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=79.947; coverage=99.038; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os06g0111800KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=80.209; coverage=100.35; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os10g0578200KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=74.868; coverage=99.213; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4339895KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=80.209; coverage=100.35; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release