Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_021967 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:141569342-141576839 (+) |
| Description | Similar to ABCB20: ABC transporter B family member 20 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_021967 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 41 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g55320 |
Probable auxin efflux transporter that contributes, together with ABCB6 and in a FKBP42/TWD1-dependent manner, to the regulation of leaf position and morphology, internode distribution, roots development, and inflorescence organization, probably by modulating auxin repartition. | |
At2g39480 |
Probable auxin efflux transporter that contributes, together with ABCB20 and in a FKBP42/TWD1-dependent manner, to the regulation of leaf position and morphology, internode distribution, roots development, and inflorescence organization, probably by modulating auxin repartition. | |
At2g36910 |
May participate in brassinosteroid export and related signaling. |
Arabidopsis TWISTED DWARF1 regulates stamen elongation by differential activation of ABCB1,19-mediated auxin transport.2022 · DOI: 10.1093/jxb/erac185 Loss of Multiple ABCB Auxin Transporters Recapitulates the Major twisted dwarf 1 Phenotypes in Arabidopsis thaliana .2022 · DOI: 10.3389/fpls.2022.840260
|
At1g10680 |
ABC transporter B family member 10. | No verified direct reference in this release |
At2g47000 |
Auxin influx transporter that mediates the transport of auxin in roots. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0008361 | regulation of cell size | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009624 | response to nematode | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=HEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009637 | response to blue light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009639 | response to red or far red light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009640 | photomorphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009741 | response to brassinosteroid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009742 | brassinosteroid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009926 | auxin polar transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009958 | positive gravitropism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010315 | auxin export across the plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010928 | regulation of auxin mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043481 | anthocyanin accumulation in tissues in response to UV light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048229 | gametophyte development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048281 | inflorescence morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048439 | flower morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048443 | stamen development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048461 | flower structural organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051510 | regulation of unidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055085 | transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090627 | plant epidermal cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090707 | establishment of plant organ orientation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900459 | positive regulation of brassinosteroid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000024 | regulation of leaf development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=39.35; coverage=96.431; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010328 | auxin influx transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010329 | auxin efflux transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042626 | ATPase-coupled transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140359 | ABC-type transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.347; coverage=103.205; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G10680 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=39.35; coverage=96.431; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G36910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.506; coverage=97.815; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G39480 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.347; coverage=103.205; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G55320 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.347; coverage=103.205; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |