Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_016239`
Query reference	OH1004
Location	Chr03:116264397-116266669 (+)
Description	Similar to XAT2: Alpha-1%2C3-arabinosyltransferase XAT2 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_016239 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 10 GO annotations and 9 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g10320`	Glycosyletransferase required for the proper composition and structural properties of released seed coat mucilage.	Highly Branched Xylan Made by IRREGULAR XYLEM14 and MUCILAGE-RELATED21 Links Mucilage to Arabidopsis Seeds.2015 · DOI: 10.1104/pp.15.01441 Xylans Provide the Structural Driving Force for Mucilage Adhesion to the Arabidopsis Seed Coat.2016 · DOI: 10.1104/pp.16.00211

Rice

Reference gene ID	Possible function	Papers / DOI
`Os02g0330200`	Glycosyltransferase involved in the arabinosylation of xylan, the major hemicellulose (non-cellulosic component) of primary and secondary walls of angiosperms.	No verified direct reference in this release
`Os03g0567600`	Glycosyltransferase involved in the arabinosylation of xylan, the major hemicellulose (non-cellulosic component) of primary and secondary walls of angiosperms.	No verified direct reference in this release
`Os02g0329800`	Glycosyltransferase involved in the xylosylation of xylan, the major hemicellulose (non-cellulosic component) of primary and secondary walls of angiosperms.	XAX1 from glycosyltransferase family 61 mediates xylosyltransfer to rice xylan.2012 · DOI: 10.1073/pnas.1202079109
`Os06g0707000`	Glycosyltransferase involved in the xylosylation of xylan, the major hemicellulose (non-cellulosic component) of primary and secondary walls of angiosperms.	A Novel Rice Xylosyltransferase Catalyzes the Addition of 2-O-Xylosyl Side Chains onto the Xylan Backbone.2018 · DOI: 10.1093/pcp/pcy003

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0009664	plant-type cell wall organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.173; coverage=72.996; evalue=3.92e-80; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010192	mucilage biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.498; coverage=101.688; evalue=2.92e-77; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048354	mucilage biosynthetic process involved in seed coat development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.498; coverage=101.688; evalue=2.92e-77; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071555	cell wall organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.498; coverage=101.688; evalue=2.92e-77; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000139	Golgi membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.173; coverage=72.996; evalue=3.92e-80; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005794	Golgi apparatus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.498; coverage=101.688; evalue=2.92e-77; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016757	glycosyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.173; coverage=72.996; evalue=3.92e-80; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0035252	UDP-xylosyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.171; coverage=80.38; evalue=1.86e-65; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0047517	1,4-beta-D-xylan synthase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.498; coverage=101.688; evalue=2.92e-77; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0052636	arabinosyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.173; coverage=72.996; evalue=3.92e-80; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G10320	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.498; coverage=101.688; evalue=2.92e-77	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os02g0329800	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.171; coverage=80.38; evalue=1.86e-65	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os02g0330200	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.173; coverage=72.996; evalue=3.92e-80	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os03g0567600	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.589; coverage=71.941; evalue=2.09e-77	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os06g0707000	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=39.542; coverage=64.557; evalue=2.99e-65	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4329203	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.171; coverage=80.38; evalue=1.86e-65	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4329205	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.173; coverage=72.996; evalue=3.92e-80	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4333275	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.589; coverage=71.941; evalue=2.09e-77	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4342010	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=39.542; coverage=64.557; evalue=2.99e-65	UniProtKB/Swiss-Prot DAT 2026 current_release