基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_006533 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr02:13049102-13057594 (+) |
| 描述 | Similar to WDR12: Ribosome biogenesis protein WDR12 homolog (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_006533 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 41 条 GO 注释和 6 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g15550 |
参与核糖体RNA成熟及大核糖体亚基的形成。 | 暂无已核实直接文献 |
At5g61010 |
影响SEC5A、SEC15A、SEC15B和EXO84B等胞吐复合体(exocyst)蛋白的亚细胞定位,促使其被募集至分布于胞质中的明显大点状胞吐复合体结构。 | |
At5g58430 |
胞吐复合体(exocyst)亚复合物的组分,特异性参与自噬相关且不依赖高尔基体的向液泡膜运输。 | |
At1g07000 |
胞吐复合体(exocyst)亚复合物的组分,特异性参与自噬相关且不依赖高尔基体的向液泡膜运输。 |
The role for the exocyst complex subunits Exo70B2 and Exo70H1 in the plant-pathogen interaction.2011 · DOI: 10.1093/jxb/erq402
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os07g0600400 |
参与核糖体RNA成熟及大核糖体亚基的形成。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000463 | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.281; 覆盖度=35.758; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000466 | maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.281; 覆盖度=35.758; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002237 | response to molecule of bacterial origin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.008; 覆盖度=56.71; E 值=1.65e-89; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002238 | response to molecule of fungal origin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.008; 覆盖度=56.71; E 值=1.65e-89; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006887 | exocytosis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.259; 覆盖度=57.056; E 值=3.63e-96; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006955 | immune response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.259; 覆盖度=57.056; E 值=3.63e-96; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009617 | response to bacterium | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.008; 覆盖度=56.71; E 值=1.65e-89; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009620 | response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.008; 覆盖度=56.71; E 值=1.65e-89; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009789 | positive regulation of abscisic acid-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.259; 覆盖度=57.056; E 值=3.63e-96; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042545 | cell wall modification | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.008; 覆盖度=56.71; E 值=1.65e-89; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.259; 覆盖度=57.056; E 值=3.63e-96; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.259; 覆盖度=57.056; E 值=3.63e-96; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052542 | defense response by callose deposition | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090333 | regulation of stomatal closure | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.259; 覆盖度=57.056; E 值=3.63e-96; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900150 | regulation of defense response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.008; 覆盖度=56.71; E 值=1.65e-89; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900426 | positive regulation of defense response to bacterium | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.008; 覆盖度=56.71; E 值=1.65e-89; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901332 | negative regulation of lateral root development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.259; 覆盖度=57.056; E 值=3.63e-96; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902290 | positive regulation of defense response to oomycetes | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.008; 覆盖度=56.71; E 值=1.65e-89; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903533 | regulation of protein targeting | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903553 | positive regulation of extracellular exosome assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000145 | exocyst | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.281; 覆盖度=35.758; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.281; 覆盖度=35.758; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.281; 覆盖度=35.758; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.259; 覆盖度=57.056; E 值=3.63e-96; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.281; 覆盖度=35.758; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030687 | preribosome, large subunit precursor | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.281; 覆盖度=35.758; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031982 | vesicle | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.259; 覆盖度=57.056; E 值=3.63e-96; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045335 | phagocytic vesicle | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.259; 覆盖度=57.056; E 值=3.63e-96; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070062 | extracellular exosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.281; 覆盖度=35.758; E 值=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043021 | ribonucleoprotein complex binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.281; 覆盖度=35.758; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905761 | SCF ubiquitin ligase complex binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G07000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.008; 覆盖度=56.71; E 值=1.65e-89 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G15550 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.281; 覆盖度=35.758; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G58430 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.259; 覆盖度=57.056; E 值=3.63e-96 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G61010 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.5; 覆盖度=56.797; E 值=4.81e-145 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0600400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.504; 覆盖度=35.584; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4343819 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.504; 覆盖度=35.584; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |