基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA01G029140 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr01:7482909-7483619 (+) |
| 描述 | Similar to Os01g0192000: Zinc finger CCCH domain-containing protein 2 (Oryza sativa subsp. japonica OX%3D39947) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_005626 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 15 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g25900 |
含锌指CCCH结构域蛋白23。 | 暂无已核实直接文献 |
At2g19810 |
含锌指CCCH结构域蛋白20。 | 暂无已核实直接文献 |
At4g29190 |
含锌指CCCH结构域蛋白49。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os05g0195200 |
含锌指CCCH结构域蛋白35。 | 暂无已核实直接文献 |
Os01g0192000 |
参与延缓叶片衰老。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=46.012; 覆盖度=98.489; E 值=2.56e-72; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006979 | response to oxidative stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=46.012; 覆盖度=98.489; E 值=2.56e-72; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009867 | jasmonic acid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.737; 覆盖度=91.843; E 值=5.24e-74; UniProt GO evidence=IMP:Gramene | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010150 | leaf senescence | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.737; 覆盖度=91.843; E 值=5.24e-74; UniProt GO evidence=IMP:Gramene | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=46.012; 覆盖度=98.489; E 值=2.56e-72; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051607 | defense response to virus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=46.012; 覆盖度=98.489; E 值=2.56e-72; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061157 | mRNA destabilization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.062; 覆盖度=97.885; E 值=2.77e-69; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.737; 覆盖度=91.843; E 值=5.24e-74; UniProt GO evidence=IDA:Gramene | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.062; 覆盖度=97.885; E 值=2.77e-69; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=46.012; 覆盖度=98.489; E 值=2.56e-72; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.737; 覆盖度=91.843; E 值=5.24e-74; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=46.012; 覆盖度=98.489; E 值=2.56e-72; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.062; 覆盖度=97.885; E 值=2.77e-69; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003727 | single-stranded RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.062; 覆盖度=97.885; E 值=2.77e-69; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.737; 覆盖度=91.843; E 值=5.24e-74; UniProt GO evidence=IC:Gramene | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G19810 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=46.012; 覆盖度=98.489; E 值=2.56e-72 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G25900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.062; 覆盖度=97.885; E 值=2.77e-69 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G29190 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.148; 覆盖度=81.571; E 值=7.7e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0192000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.737; 覆盖度=91.843; E 值=5.24e-74 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os05g0195200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.58; 覆盖度=92.749; E 值=1.04e-70 | UniProtKB/Swiss-Prot DAT 2026 current_release |