Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_037019 |
|---|---|
| Query reference | OH1004 |
| Location | Chr08:51780499-51792744 (-) |
| Description | Similar to SCC3: Sister-chromatid cohesion protein 3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_037019 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 33 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g47980 |
Essential component of cohesin complex, a complex required for the cohesion of sister chromatids after DNA replication. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000278 | mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.463; coverage=94.901; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007062 | sister chromatid cohesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.463; coverage=94.901; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007065 | male meiosis sister chromatid cohesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.356; coverage=66.811; evalue=1.03e-54; UniProt GO evidence=ISS:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007066 | female meiosis sister chromatid cohesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.356; coverage=66.811; evalue=1.03e-54; UniProt GO evidence=ISS:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007129 | homologous chromosome pairing at meiosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.356; coverage=66.811; evalue=1.03e-54; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007130 | synaptonemal complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.556; coverage=62.23; evalue=7.74e-59; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034087 | establishment of mitotic sister chromatid cohesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.229; coverage=78.479; evalue=3.41e-58; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034089 | establishment of meiotic sister chromatid cohesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.556; coverage=62.23; evalue=7.74e-59; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034502 | protein localization to chromosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.356; coverage=66.811; evalue=1.03e-54; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.463; coverage=94.901; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051455 | spindle attachment to meiosis I kinetochore | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.463; coverage=94.901; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051754 | meiotic sister chromatid cohesion, centromeric | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.463; coverage=94.901; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090307 | mitotic spindle assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.229; coverage=78.479; evalue=3.41e-58; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000775 | chromosome, centromeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.556; coverage=62.23; evalue=7.74e-59; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.463; coverage=94.901; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000794 | condensed nuclear chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.356; coverage=66.811; evalue=1.03e-54; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000795 | synaptonemal complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.556; coverage=62.23; evalue=7.74e-59; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000800 | lateral element | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.356; coverage=66.811; evalue=1.03e-54; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000802 | transverse filament | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.356; coverage=66.811; evalue=1.03e-54; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001673 | male germ cell nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.356; coverage=66.811; evalue=1.03e-54; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005615 | extracellular space | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.556; coverage=62.23; evalue=7.74e-59; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.463; coverage=94.901; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.556; coverage=62.23; evalue=7.74e-59; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.463; coverage=94.901; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.556; coverage=62.23; evalue=7.74e-59; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.229; coverage=78.479; evalue=3.41e-58; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005929 | cilium | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.229; coverage=78.479; evalue=4.17e-58; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008278 | cohesin complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.463; coverage=94.901; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016363 | nuclear matrix | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.229; coverage=78.479; evalue=3.41e-58; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.229; coverage=78.479; evalue=3.41e-58; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030893 | meiotic cohesin complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.556; coverage=62.23; evalue=7.74e-59; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097431 | mitotic spindle pole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.229; coverage=78.479; evalue=3.41e-58; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.463; coverage=94.901; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G47980 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.463; coverage=94.901; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:10274 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.229; coverage=78.479; evalue=3.41e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:10734 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.556; coverage=62.23; evalue=7.74e-59 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:20842 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.229; coverage=78.479; evalue=4.17e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:50878 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.356; coverage=66.811; evalue=1.03e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release |