Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_036478 |
|---|---|
| Query reference | OH1004 |
| Location | Chr08:43021508-43025897 (+) |
| Description | Similar to Os05g0117600: E3 UFM1-protein ligase 1 homolog (Oryza sativa subsp. japonica OX%3D39947) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_036478 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 34 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g46220 |
E3 UFM1-protein ligase that mediates ufmylation of target proteins. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os05g0117600 |
E3 UFM1-protein ligase that mediates ufmylation of target proteins. | No verified direct reference in this release |
UniProt: B8AXB6 |
E3 UFM1-protein ligase that mediates ufmylation of target proteins. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000077 | DNA damage checkpoint signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008284 | positive regulation of cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010508 | positive regulation of autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031397 | negative regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032434 | regulation of proteasomal ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.248; coverage=101.244; evalue=0.0; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032790 | ribosome disassembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032880 | regulation of protein localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033146 | regulation of intracellular estrogen receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034976 | response to endoplasmic reticulum stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.248; coverage=101.244; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043122 | regulation of canonical NF-kappaB signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050821 | protein stabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061709 | reticulophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.248; coverage=101.244; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071569 | protein ufmylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.248; coverage=101.244; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072344 | rescue of stalled cytosolic ribosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140501 | positive regulation of reticulophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902065 | response to L-glutamate | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903052 | positive regulation of proteolysis involved in protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903895 | negative regulation of IRE1-mediated unfolded protein response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990592 | protein K69-linked ufmylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.248; coverage=101.244; evalue=0.0; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005741 | mitochondrial outer membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.248; coverage=101.244; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035861 | site of double-strand break | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990234 | transferase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019901 | protein kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061666 | UFM1 ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.248; coverage=101.244; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071568 | UFM1 transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.248; coverage=101.244; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G46220 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=59.181; coverage=100.249; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os05g0117600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.248; coverage=101.244; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:9266232 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.248; coverage=101.244; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:313115 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.411; coverage=99.378; evalue=5.94e-80 | UniProtKB/Swiss-Prot DAT 2026 current_release |