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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_028051
Query referenceOH1004
LocationChr06:29714942-29716799 (-)
DescriptionSimilar to HO1: Heme oxygenase 1%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_028051 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 24 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g26670 Key enzyme in the synthesis of the chromophore of the phytochrome family of plant photoreceptors.
Arabidopsis genomes uncoupled 5 (GUN5) mutant reveals the involvement of Mg-chelatase H subunit in plastid-to-nucleus signal transduction.2001 · DOI: 10.1073/pnas.98.4.2053
Signal transduction mutants of Arabidopsis uncouple nuclear CAB and RBCS gene expression from chloroplast development.1993 · DOI: 10.1016/0092-8674(93)90459-4
At1g69720 Catalyzes the opening of the heme ring to form the open-chain tetrapyrrole biliverdin IX with the release of iron and carbon monoxide (CO). No verified direct reference in this release
At1g58300 Catalyzes the opening of the heme ring to form the open-chain tetrapyrrole biliverdin IX with the release of iron and carbon monoxide (CO). No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os06g0603000 Catalyzes the opening of the heme ring to form the open-chain tetrapyrrole biliverdin IX with the release of iron and carbon monoxide (CO). No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006788heme oxidationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.82; coverage=103.214; evalue=2.15e-135; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009609response to symbiotic bacteriumBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.82; coverage=103.214; evalue=2.15e-135; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009646response to absence of lightBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.82; coverage=103.214; evalue=2.15e-135; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009648photoperiodismBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.905; coverage=75.0; evalue=2.74e-115; UniProt GO evidence=IMP:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009813flavonoid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.972; coverage=102.857; evalue=4.15e-133; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009877nodulationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.82; coverage=103.214; evalue=2.15e-135; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010019chloroplast-nucleus signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.972; coverage=102.857; evalue=4.15e-133; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010024phytochromobilin biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.82; coverage=103.214; evalue=2.15e-135; UniProt GO evidence=IEA:TreeGrafterUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010075regulation of meristem growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.972; coverage=102.857; evalue=4.15e-133; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010119regulation of stomatal movementBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.972; coverage=102.857; evalue=4.15e-133; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010167response to nitrateBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.82; coverage=103.214; evalue=2.15e-135; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010229inflorescence developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.905; coverage=75.0; evalue=2.74e-115; UniProt GO evidence=IMP:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015979photosynthesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.82; coverage=103.214; evalue=2.15e-135; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016117carotenoid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.972; coverage=102.857; evalue=4.15e-133; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042167heme catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.82; coverage=103.214; evalue=2.15e-135; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048573photoperiodism, floweringBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.905; coverage=75.0; evalue=2.74e-115; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051702biological process involved in interaction with symbiontBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.82; coverage=103.214; evalue=2.15e-135; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071494cellular response to UV-CBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.972; coverage=102.857; evalue=4.15e-133; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.82; coverage=103.214; evalue=2.15e-135; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.82; coverage=103.214; evalue=2.15e-135; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003729mRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=62.555; coverage=81.071; evalue=6.86e-100; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004392heme oxygenase (decyclizing) activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.82; coverage=103.214; evalue=2.15e-135; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0020037heme bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.972; coverage=102.857; evalue=4.15e-133; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.82; coverage=103.214; evalue=2.15e-135; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G58300KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=62.555; coverage=81.071; evalue=6.86e-100UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G69720KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.539; coverage=86.071; evalue=9.44e-123UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G26670KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.972; coverage=102.857; evalue=4.15e-133UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os06g0603000KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.905; coverage=75.0; evalue=2.74e-115UniProtKB/Swiss-Prot DAT 2026 current_release