Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022048 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:144024665-144026787 (-) |
| Description | Similar to SPL2: E3 ubiquitin-protein ligase SPL2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022048 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 36 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g54150 |
Possesses E3 ubiquitin-protein ligase activity. | No verified direct reference in this release |
At1g59560 |
Possesses E3 ubiquitin-protein ligase activity. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000209 | protein polyubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000266 | mitochondrial fission | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.014; coverage=53.964; evalue=4.75e-16; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009893 | positive regulation of metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.014; coverage=53.964; evalue=4.75e-16; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010637 | negative regulation of mitochondrial fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010821 | regulation of mitochondrion organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.819; coverage=100.512; evalue=2.96e-129; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016925 | protein sumoylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031648 | protein destabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033235 | positive regulation of protein sumoylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045824 | negative regulation of innate immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050689 | negative regulation of defense response to virus by host | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050821 | protein stabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.014; coverage=53.964; evalue=4.75e-16; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051646 | mitochondrion localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.014; coverage=53.964; evalue=4.75e-16; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051881 | regulation of mitochondrial membrane potential | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051898 | negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060339 | negative regulation of type I interferon-mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071360 | cellular response to exogenous dsRNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071650 | negative regulation of chemokine (C-C motif) ligand 5 production | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090141 | positive regulation of mitochondrial fission | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.014; coverage=53.964; evalue=4.75e-16; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904215 | regulation of protein import into chloroplast stroma | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.862; coverage=89.003; evalue=9.19e-17; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905091 | positive regulation of type 2 mitophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.819; coverage=100.512; evalue=2.96e-129; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005741 | mitochondrial outer membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.014; coverage=53.964; evalue=4.75e-16; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005777 | peroxisome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.014; coverage=53.964; evalue=4.75e-16; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.819; coverage=100.512; evalue=2.96e-129; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009707 | chloroplast outer membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.819; coverage=100.512; evalue=2.96e-129; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.819; coverage=100.512; evalue=2.96e-129; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140596 | TOM complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002039 | p53 binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.862; coverage=89.003; evalue=9.19e-17; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.819; coverage=100.512; evalue=2.96e-129; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019789 | SUMO transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031625 | ubiquitin protein ligase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.014; coverage=53.964; evalue=4.75e-16; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.819; coverage=100.512; evalue=2.96e-129; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G54150 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.819; coverage=100.512; evalue=2.96e-129 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G59560 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.862; coverage=89.003; evalue=9.19e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG1134 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.529; coverage=95.652; evalue=5.39e-16 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:79594 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.531; coverage=62.66; evalue=8.99e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:414680 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.014; coverage=53.964; evalue=4.75e-16 | UniProtKB/Swiss-Prot DAT 2026 current_release |