Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_021540 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:132116102-132121388 (+) |
| Description | Similar to CDC5: Cell division cycle 5-like protein (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_021540 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 45 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g09770 |
Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. |
Virus induced gene silencing of AtCDC5 results in accelerated cell death in Arabidopsis leaves.2007 · DOI: 10.1016/j.plaphy.2006.12.003
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000077 | DNA damage checkpoint signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000086 | G2/M transition of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=TAS:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000398 | mRNA splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044344 | cellular response to fibroblast growth factor stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045087 | innate immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IDA:NTNU_SB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071352 | cellular response to interleukin-2 | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904568 | cellular response to wortmannin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990090 | cellular response to nerve growth factor stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990646 | cellular response to prolactin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000974 | Prp19 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005662 | DNA replication factor A complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005681 | spliceosomal complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IDA:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032993 | protein-DNA complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071006 | U2-type catalytic step 1 spliceosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071007 | U2-type catalytic step 2 spliceosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071013 | catalytic step 2 spliceosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071014 | post-mRNA release spliceosomal complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071018 | U12-type catalytic step 2 spliceosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071020 | post-spliceosomal complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IDA:NTNU_SB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001222 | transcription corepressor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=IPI:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001228 | DNA-binding transcription activator activity, RNA polymerase II-specific | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IDA:NTNU_SB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008157 | protein phosphatase 1 binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=IPI:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019901 | protein kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=IPI:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043522 | leucine zipper domain binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0; UniProt GO evidence=IPI:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071987 | WD40-repeat domain binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G09770 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.13; coverage=97.468; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:767817 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.181; coverage=93.901; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:988 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.181; coverage=93.901; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:71702 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.569; coverage=93.901; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:85434 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.683; coverage=93.671; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |