Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_016253 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:116581571-116586002 (-) |
| Description | Similar to SBE3: 1%2C4-alpha-glucan-branching enzyme 3%2C chloroplastic/amyloplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_016253 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 14 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g20440 |
Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0005975 | carbohydrate metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.588; coverage=100.67; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005978 | glycogen biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.588; coverage=100.67; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009791 | post-embryonic development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.588; coverage=100.67; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019252 | starch biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.588; coverage=100.67; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.588; coverage=100.67; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.288; coverage=63.575; evalue=3.74e-156; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009501 | amyloplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.588; coverage=100.67; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.588; coverage=100.67; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.588; coverage=100.67; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.588; coverage=100.67; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003844 | 1,4-alpha-glucan branching enzyme activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.588; coverage=100.67; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.288; coverage=63.575; evalue=3.74e-156; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030246 | carbohydrate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.288; coverage=63.575; evalue=3.74e-156; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043169 | cation binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.588; coverage=100.67; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G20440 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.588; coverage=100.67; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ecb:100034152 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.053; coverage=59.441; evalue=1.5e-153 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | fca:493962 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.821; coverage=59.33; evalue=7.56e-153 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:74185 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.288; coverage=63.575; evalue=3.74e-156 | UniProtKB/Swiss-Prot DAT 2026 current_release |