Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_015029 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:62165836-62171067 (-) |
| Description | Similar to NRDE2: Nuclear exosome regulator NRDE2 (Homo sapiens OX%3D9606) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_015029 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 18 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000278 | mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006396 | RNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.619; coverage=9.099; evalue=6.75e-09; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008380 | RNA splicing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031048 | regulatory ncRNA-mediated heterochromatin formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046833 | positive regulation of RNA export from nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048255 | mRNA stabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071030 | nuclear mRNA surveillance of spliceosomal pre-mRNA splicing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.846; coverage=22.53; evalue=3.99e-12; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902369 | negative regulation of RNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902795 | siRNA-mediated facultative heterochromatin formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.846; coverage=22.53; evalue=3.99e-12; UniProt GO evidence=IGI:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005681 | spliceosomal complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.846; coverage=22.53; evalue=3.99e-12; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ddi:DDB_G0283719 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=27.619; coverage=9.099; evalue=6.75e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:55051 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.956; coverage=98.96; evalue=3.74e-73 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:217827 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=25.172; coverage=100.52; evalue=5.93e-70 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2540691 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.846; coverage=22.53; evalue=3.99e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release |