Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_011916 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:2738179-2742327 (+) |
| Description | Similar to LACS6: Long chain acyl-CoA synthetase 6%2C peroxisomal (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_011916 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 34 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g05970 |
Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation (Probable). |
Two long-chain acyl-CoA synthetases from Arabidopsis thaliana involved in peroxisomal fatty acid beta-oxidation.2002 · DOI: 10.1046/j.1365-313x.2002.01405.x Molecular characterization of an Arabidopsis acyl-coenzyme a synthetase localized on glyoxysomal membranes.2002 · DOI: 10.1104/pp.012955
|
At5g27600 |
Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation (Probable). |
Two long-chain acyl-CoA synthetases from Arabidopsis thaliana involved in peroxisomal fatty acid beta-oxidation.2002 · DOI: 10.1046/j.1365-313x.2002.01405.x
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0001676 | long-chain fatty acid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.936; coverage=18.359; evalue=8.14e-06; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006631 | fatty acid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.455; coverage=17.188; evalue=1.68e-14; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008654 | phospholipid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.02; coverage=19.141; evalue=8.44e-06; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.0; coverage=19.531; evalue=3.81e-14; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010193 | response to ozone | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.455; coverage=17.188; evalue=1.68e-14; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010747 | positive regulation of long-chain fatty acid import across plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.936; coverage=18.359; evalue=8.14e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010867 | positive regulation of triglyceride biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.02; coverage=19.141; evalue=8.44e-06; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015908 | fatty acid transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.02; coverage=19.141; evalue=8.44e-06; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016114 | terpenoid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.766; coverage=30.078; evalue=7.85e-06; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032000 | positive regulation of fatty acid beta-oxidation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.02; coverage=19.141; evalue=8.44e-06; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035338 | long-chain fatty-acyl-CoA biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.936; coverage=18.359; evalue=8.14e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.0; coverage=19.531; evalue=3.81e-14; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.02; coverage=19.141; evalue=8.44e-06; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.02; coverage=19.141; evalue=8.44e-06; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.936; coverage=18.359; evalue=8.14e-06; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005741 | mitochondrial outer membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.936; coverage=18.359; evalue=8.14e-06; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005743 | mitochondrial inner membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.02; coverage=19.141; evalue=8.44e-06; UniProt GO evidence=HDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005777 | peroxisome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.455; coverage=17.188; evalue=1.68e-14; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005782 | peroxisomal matrix | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.766; coverage=30.078; evalue=7.85e-06; UniProt GO evidence=IDA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.455; coverage=17.188; evalue=1.68e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.936; coverage=18.359; evalue=8.14e-06; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.455; coverage=17.188; evalue=1.68e-14; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.936; coverage=18.359; evalue=8.14e-06; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.455; coverage=17.188; evalue=1.68e-14; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.0; coverage=19.531; evalue=3.81e-14; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.455; coverage=17.188; evalue=1.68e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046861 | glyoxysomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.455; coverage=17.188; evalue=1.68e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004467 | long-chain fatty acid-CoA ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.455; coverage=17.188; evalue=1.68e-14; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.455; coverage=17.188; evalue=1.68e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016405 | CoA-ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.766; coverage=30.078; evalue=7.85e-06; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016874 | ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.766; coverage=30.078; evalue=7.85e-06; UniProt GO evidence=IDA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0047676 | arachidonate-CoA ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.936; coverage=18.359; evalue=8.14e-06; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090434 | oleoyl-CoA ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.936; coverage=18.359; evalue=8.14e-06; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0102391 | decanoate-CoA ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.0; coverage=19.531; evalue=3.81e-14; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G05970 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.455; coverage=17.188; evalue=1.68e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G27600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.0; coverage=19.531; evalue=3.81e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:51703 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.936; coverage=18.359; evalue=8.14e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:433256 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.02; coverage=19.141; evalue=8.44e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release |