Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_011776 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:32875-38619 (-) |
| Description | Similar to spoT: Probable guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase (Synechocystis sp. (strain PCC 6803 / Kazusa) OX%3D1111708) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_011776 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 12 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g54130 |
Possesses ppGpp (guanosine 3'-diphosphate 5'-diphosphate) synthetase activity in vitro and is able to functionally complement E.coli relA mutants. | |
At3g14050 |
Possesses ppGpp (guanosine 3'-diphosphate 5'-diphosphate) synthetase activity in vitro and is able to functionally complement E.coli relA mutants. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os08g0457600 |
Probable ppGpp (guanosine 3'-diphosphate 5'-diphosphate) synthetase that may be involved in a rapid plant ppGpp-mediated response to pathogens and other stresses. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0010150 | leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.727; coverage=51.342; evalue=2.13e-46; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015949 | nucleobase-containing small molecule interconversion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.637; coverage=50.525; evalue=4.68e-47; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015969 | guanosine tetraphosphate metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.03; coverage=51.225; evalue=4.1e-46; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015970 | guanosine tetraphosphate biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.043; coverage=53.676; evalue=4.24e-58; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015979 | photosynthesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.727; coverage=51.342; evalue=2.13e-46; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.637; coverage=50.525; evalue=4.68e-47; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.727; coverage=51.342; evalue=2.13e-46; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.727; coverage=51.342; evalue=2.13e-46; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005525 | GTP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.727; coverage=51.342; evalue=2.13e-46; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008728 | GTP diphosphokinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.727; coverage=51.342; evalue=2.13e-46; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008893 | guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.043; coverage=53.676; evalue=4.24e-58; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016301 | kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.727; coverage=51.342; evalue=2.13e-46; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G54130 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.727; coverage=51.342; evalue=2.13e-46 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bbu:BB_0198 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.637; coverage=50.525; evalue=4.68e-47 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os08g0457600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.03; coverage=51.225; evalue=4.1e-46 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syn:slr1325 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.043; coverage=53.676; evalue=4.24e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release |