Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_009532`
Query reference	OH1004
Location	Chr02:128282365-128285908 (-)
Description	Similar to MORC6: Protein MICRORCHIDIA 6 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009532 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 27 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g19100`	Involved in RNA-directed DNA methylation (RdDM) as a component of the RdDM machinery and required for gene silencing.	MORC family ATPases required for heterochromatin condensation and gene silencing.2012 · DOI: 10.1126/science.1221472 Involvement of a GHKL ATPase in RNA-directed DNA methylation in Arabidopsis thaliana.2012 · DOI: 10.1016/j.cub.2012.03.061 The stochastic silencing phenotype of Arabidopsis morc6 mutants reveals a role in efficient RNA-directed DNA methylation.2013 · DOI: 10.1111/tpj.12246 Arabidopsis AtMORC4 and AtMORC7 Form Nuclear Bodies and Repress a Large Number of Protein-Coding Genes.2016 · DOI: 10.1371/journal.pgen.1005998 Two Components of the RNA-Directed DNA Methylation Pathway Associate with MORC6 and Silence Loci Targeted by MORC6 in Arabidopsis.2016 · DOI: 10.1371/journal.pgen.1006026
`At4g36280`	Mediator of defense signaling triggered by distinct classes of R proteins.	Endosome-associated CRT1 functions early in resistance gene-mediated defense signaling in Arabidopsis and tobacco.2010 · DOI: 10.1105/tpc.109.071662 CRT1 is a nuclear-translocated MORC endonuclease that participates in multiple levels of plant immunity.2012 · DOI: 10.1038/ncomms2279 Transcriptional gene silencing by Arabidopsis microrchidia homologues involves the formation of heteromers.2014 · DOI: 10.1073/pnas.1406611111
`At4g36290`	Mediator of defense signaling triggered by distinct classes of R proteins.	MORC family ATPases required for heterochromatin condensation and gene silencing.2012 · DOI: 10.1126/science.1221472 Transcriptional gene silencing by Arabidopsis microrchidia homologues involves the formation of heteromers.2014 · DOI: 10.1073/pnas.1406611111
`At5g50780`	Exhibits ATPase activity.	Arabidopsis AtMORC4 and AtMORC7 Form Nuclear Bodies and Repress a Large Number of Protein-Coding Genes.2016 · DOI: 10.1371/journal.pgen.1005998
`At4g24970`	Exhibits ATPase activity.	Arabidopsis AtMORC4 and AtMORC7 Form Nuclear Bodies and Repress a Large Number of Protein-Coding Genes.2016 · DOI: 10.1371/journal.pgen.1005998

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0002230	positive regulation of defense response to virus by host	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.234; coverage=88.987; evalue=1.01e-150; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006281	DNA repair	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006282	regulation of DNA repair	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006325	chromatin organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.372; coverage=90.015; evalue=9.88e-155; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009626	plant-type hypersensitive response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.372; coverage=90.015; evalue=9.88e-155; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031047	regulatory ncRNA-mediated gene silencing	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.372; coverage=90.015; evalue=9.88e-155; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0034052	positive regulation of plant-type hypersensitive response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.234; coverage=88.987; evalue=1.01e-150; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051607	defense response to virus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.372; coverage=90.015; evalue=9.88e-155; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0060966	regulation of gene silencing by regulatory ncRNA	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080188	gene silencing by siRNA-directed DNA methylation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0098542	defense response to other organism	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900426	positive regulation of defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.372; coverage=90.015; evalue=9.88e-155; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901672	positive regulation of systemic acquired resistance	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.372; coverage=90.015; evalue=9.88e-155; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1902290	positive regulation of defense response to oomycetes	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005654	nucleoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.316; coverage=69.75; evalue=1.32e-135; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005768	endosome	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.372; coverage=90.015; evalue=9.88e-155; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009506	plasmodesma	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009941	chloroplast envelope	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016604	nuclear body	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.316; coverage=69.75; evalue=1.32e-135; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003723	RNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004519	endonuclease activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005524	ATP binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016301	kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.372; coverage=90.015; evalue=9.88e-155; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016887	ATP hydrolysis activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042803	protein homodimerization activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G19100	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.704; coverage=95.154; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G24970	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.534; coverage=65.492; evalue=1.23e-131	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G36280	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.372; coverage=90.015; evalue=9.88e-155	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G36290	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.234; coverage=88.987; evalue=1.01e-150	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G50780	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.316; coverage=69.75; evalue=1.32e-135	UniProtKB/Swiss-Prot DAT 2026 current_release