Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_008718 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:106858546-106859725 (-) |
| Description | Similar to SPL6: Squamosa promoter-binding-like protein 6 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_008718 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 20 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g69170 |
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. | No verified direct reference in this release |
At1g02065 |
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. |
SPL8, an SBP-box gene that affects pollen sac development in Arabidopsis.2003 · DOI: 10.1105/tpc.010678
|
At5g43270 |
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. | No verified direct reference in this release |
At5g50670 |
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. | No verified direct reference in this release |
At5g50570 |
Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.725; coverage=30.435; evalue=2.15e-39; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.725; coverage=30.435; evalue=2.15e-39; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009554 | megasporogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.25; coverage=26.756; evalue=4.7e-33; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.25; coverage=26.756; evalue=4.7e-33; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009556 | microsporogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.25; coverage=26.756; evalue=4.7e-33; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009620 | response to fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.872; coverage=52.174; evalue=2.12e-32; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.872; coverage=52.174; evalue=2.12e-32; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.725; coverage=30.435; evalue=2.15e-39; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.25; coverage=26.756; evalue=4.7e-33; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.725; coverage=30.435; evalue=2.15e-39; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.75; coverage=26.756; evalue=1.41e-32; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048653 | anther development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.25; coverage=26.756; evalue=4.7e-33; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090356 | negative regulation of auxin metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.75; coverage=26.756; evalue=1.41e-32; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.725; coverage=30.435; evalue=2.15e-39; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.25; coverage=26.756; evalue=4.7e-33; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.725; coverage=30.435; evalue=2.15e-39; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001216 | DNA-binding transcription activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.725; coverage=30.435; evalue=2.15e-39; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.25; coverage=26.756; evalue=4.7e-33; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.725; coverage=30.435; evalue=2.15e-39; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.725; coverage=30.435; evalue=2.15e-39; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G02065 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.25; coverage=26.756; evalue=4.7e-33 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G69170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.725; coverage=30.435; evalue=2.15e-39 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G43270 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.75; coverage=26.756; evalue=1.41e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G50570 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.872; coverage=52.174; evalue=2.12e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G50670 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.872; coverage=52.174; evalue=2.12e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release |