Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_005817`
Query reference	OH1004
Location	Chr01:173844070-173847042 (-)
Description	Similar to SMO1-2: Methylsterol monooxygenase 1-2 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_005817 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 15 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At4g22756`	Non-heme iron oxygenase involved in sterols biosynthesis by catalyzing the removal of the first methyl group at the C-4 position (By similarity).	Arabidopsis ACYL-COA-BINDING PROTEIN1 interacts with STEROL C4-METHYL OXIDASE1-2 to modulate gene expression of homeodomain-leucine zipper IV transcription factors.2018 · DOI: 10.1111/nph.14965 The SMO1 Family of Sterol 4α-Methyl Oxidases Is Essential for Auxin- and Cytokinin-Regulated Embryogenesis.2019 · DOI: 10.1104/pp.19.00144
`At4g12110`	Non-heme iron oxygenase involved in sterols biosynthesis by catalyzing the removal of the first methyl group at the C-4 position.	Acyl-CoA-Binding Protein ACBP1 Modulates Sterol Synthesis during Embryogenesis.2017 · DOI: 10.1104/pp.17.00412 The SMO1 Family of Sterol 4α-Methyl Oxidases Is Essential for Auxin- and Cytokinin-Regulated Embryogenesis.2019 · DOI: 10.1104/pp.19.00144
`At4g22755`	Non-heme iron oxygenase involved in sterols biosynthesis by catalyzing the removal of the first methyl group at the C-4 position (By similarity).	No verified direct reference in this release
`At1g07420`	Non-heme iron oxygenase involved in sterols biosynthesis by catalyzing the removal of the second methyl group at the C-4 position.	Functional identification of sterol-4alpha-methyl oxidase cDNAs from Arabidopsis thaliana by complementation of a yeast erg25 mutant lacking sterol-4alpha-methyl oxidation.2001 · DOI: 10.1016/s0014-5793(01)03002-2 Sterol Methyl Oxidases Affect Embryo Development via Auxin-Associated Mechanisms.2016 · DOI: 10.1104/pp.15.01814

Rice

Reference gene ID	Possible function	Papers / DOI
`Os10g0545200`	Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0009793	embryo development ending in seed dormancy	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.701; coverage=86.395; evalue=6.84e-70; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016126	sterol biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.779; coverage=98.299; evalue=2.42e-166; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0055089	fatty acid homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.779; coverage=98.299; evalue=2.42e-166; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0055092	sterol homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.779; coverage=98.299; evalue=2.42e-166; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080064	4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.779; coverage=98.299; evalue=2.42e-166; UniProt GO evidence=NAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080065	4-alpha-methyl-delta7-sterol oxidation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.701; coverage=86.395; evalue=6.84e-70; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=66.894; coverage=99.66; evalue=8.67e-150; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005783	endoplasmic reticulum	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.779; coverage=98.299; evalue=2.42e-166; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005789	endoplasmic reticulum membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.779; coverage=98.299; evalue=2.42e-166; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009941	chloroplast envelope	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.701; coverage=86.395; evalue=6.84e-70; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.819; coverage=101.361; evalue=2.16e-164; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000254	C-4 methylsterol oxidase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.779; coverage=98.299; evalue=2.42e-166; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005506	iron ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.779; coverage=98.299; evalue=2.42e-166; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071771	aldehyde oxygenase (deformylating) activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.729; coverage=98.98; evalue=9.15e-148; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0102177	24-methylenelophenol methyl oxidase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=66.894; coverage=99.66; evalue=8.67e-150; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G07420	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.701; coverage=86.395; evalue=6.84e-70	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G12110	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.819; coverage=101.361; evalue=2.16e-164	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G22755	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=66.894; coverage=99.66; evalue=8.67e-150	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G22756	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.779; coverage=98.299; evalue=2.42e-166	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os10g0545200	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.729; coverage=98.98; evalue=9.15e-148	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4349278	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.729; coverage=98.98; evalue=9.15e-148	UniProtKB/Swiss-Prot DAT 2026 current_release