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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_000638
Query referenceOH1004
LocationChr01:11669373-11670698 (+)
DescriptionSimilar to At2g30020: Probable protein phosphatase 2C 25 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_000638 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g30020 Protein phosphatase that negatively regulates defense respones. No verified direct reference in this release
At1g07160 Probable protein phosphatase 2C 2. No verified direct reference in this release
At2g40180 Probable protein phosphatase 2C 30. No verified direct reference in this release
At1g67820 Probable protein phosphatase 2C 14. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os03g0292100 Probable protein phosphatase 2C 32. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009611response to woundingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.5; coverage=105.82; evalue=3.53e-139; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009620response to fungusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.5; coverage=105.82; evalue=3.53e-139; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009738abscisic acid-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.5; coverage=105.82; evalue=3.53e-139; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010440stomatal lineage progressionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.256; coverage=82.54; evalue=2.58e-123; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050832defense response to fungusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.5; coverage=105.82; evalue=3.53e-139; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.5; coverage=105.82; evalue=3.53e-139; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.256; coverage=82.54; evalue=2.58e-123; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.5; coverage=105.82; evalue=3.53e-139; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.5; coverage=105.82; evalue=3.53e-139; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.329; coverage=102.91; evalue=4.44e-106; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004722protein serine/threonine phosphatase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.5; coverage=105.82; evalue=3.53e-139; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.5; coverage=105.82; evalue=3.53e-139; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G07160KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.355; coverage=102.91; evalue=5.28e-136UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G67820KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.196; coverage=67.46; evalue=2.2e-76UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G30020KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.5; coverage=105.82; evalue=3.53e-139UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G40180KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.256; coverage=82.54; evalue=2.58e-123UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0292100KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.329; coverage=102.91; evalue=4.44e-106UniProtKB/Swiss-Prot DAT 2026 current_release