Rubber Dandelion TF Binding Site Prediction

Predict candidate transcription-factor binding sites from submitted DNA sequences or 4000 bp upstream regions using TF binding motifs. Results are motif-supported computational candidates, not experimentally validated regulation.

1174motifs
45224upstream sequences
4000 bpprediction length

Scan 4000 bp Upstream by Gene ID

Scan Submitted DNA Sequence

Example CDS

未能把输入 ID 解析到 TK1151 基因,无法提取 4000 bp 上游序列。

Candidate Binding Sites

Input ID
LXL04_000004
Unified Gene ID
LXL04_000004
TK1151 ID
LXL04_000004
Scan Region
0 bp; upstream 4000 bp
Threshold
0.95
Motif Source
JASPAR2024 CORE plants non-redundant

Download Current Query TSV

Total candidate sites: 0