Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00332
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 19
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00332The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00332 |
Chr08:46340960-46888140 | Chr03:147703645-148289029 | mixed | 19 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 19 · Showing 1–19 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA08G177050 | LXL04_017374 | JCVI_TKOH_00332 | 96.7 | 86.525 / 42.361 | Review |
TkA08G177520 | LXL04_017376 | JCVI_TKOH_00332 | 95.0 | 100.0 / 100.0 | Complex |
TkA08G177550 | LXL04_017377 | JCVI_TKOH_00332 | 100.0 | 73.034 / 73.034 | Complex |
TkA08G177560 | LXL04_017378 | JCVI_TKOH_00332 | 95.7 | 95.833 / 51.111 | Review |
TkA08G177780 | LXL04_017379 | JCVI_TKOH_00332 | 98.6 | 72.549 / 64.348 | Complex |
TkA08G177860 | LXL04_017381 | JCVI_TKOH_00332 | 99.0 | 92.793 / 31.498 | Review |
TkA08G177990 | LXL04_017382 | JCVI_TKOH_00332 | 100.0 | 99.697 / 86.352 | Complex |
TkA08G178170 | LXL04_017385 | JCVI_TKOH_00332 | 97.3 | 100.0 / 100.0 | Probable |
TkA08G178260 | LXL04_017386 | JCVI_TKOH_00332 | 100.0 | 90.678 / 100.0 | Complex |
TkA08G178290 | LXL04_017387 | JCVI_TKOH_00332 | 90.2 | 100.0 / 100.0 | Complex |
TkA08G178300 | LXL04_017388 | JCVI_TKOH_00332 | 99.7 | 100.0 / 100.0 | Complex |
TkA08G178350 | LXL04_017390 | JCVI_TKOH_00332 | 96.3 | 100.0 / 100.0 | Probable |
TkA08G178630 | LXL04_017393 | JCVI_TKOH_00332 | 100.0 | 100.0 / 100.0 | Probable |
TkA08G178640 | LXL04_017394 | JCVI_TKOH_00332 | 99.6 | 100.0 / 87.87 | Probable |
TkA08G178670 | LXL04_017396 | JCVI_TKOH_00332 | 96.5 | 99.695 / 46.324 | Review |
TkA08G178720 | LXL04_017396 | JCVI_TKOH_00332 | 96.5 | 99.695 / 46.324 | Review |
TkA08G178930 | LXL04_017397 | JCVI_TKOH_00332 | 98.6 | 100.0 / 100.0 | Complex |
TkA08G178960 | LXL04_017398 | JCVI_TKOH_00332 | 100.0 | 100.0 / 74.919 | Probable |
TkA08G179080 | LXL04_017399 | JCVI_TKOH_00332 | 99.1 | 100.0 / 47.083 | Review |