Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00311
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 22
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00311The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00311 |
Chr07:93966363-95320935 | Chr06:107031360-108581067 | mixed | 22 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 22 · Showing 1–22 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA07G374500 | LXL04_030118 | JCVI_TKOH_00311 | 99.4 | 100.0 / 100.0 | Strict |
TkA07G374510 | LXL04_030117 | JCVI_TKOH_00311 | 100.0 | 100.0 / 100.0 | Strict |
TkA07G374850 | LXL04_030116 | JCVI_TKOH_00311 | 100.0 | 100.0 / 100.0 | Strict |
TkA07G374900 | LXL04_030115 | JCVI_TKOH_00311 | 100.0 | 100.0 / 100.0 | Strict |
TkA07G374940 | LXL04_030113 | JCVI_TKOH_00311 | 98.7 | 60.078 / 96.273 | Review |
TkA07G375370 | LXL04_030105 | JCVI_TKOH_00311 | 100.0 | 100.0 / 100.0 | Strict |
TkA07G375380 | LXL04_030103 | JCVI_TKOH_00311 | 100.0 | 100.0 / 100.0 | Strict |
TkA07G375560 | LXL04_030102 | JCVI_TKOH_00311 | 100.0 | 100.0 / 100.0 | Complex |
TkA07G375620 | LXL04_030101 | JCVI_TKOH_00311 | 98.2 | 100.0 / 100.0 | Strict |
TkA07G375630 | LXL04_030100 | JCVI_TKOH_00311 | 97.5 | 100.0 / 100.0 | Strict |
TkA07G376980 | LXL04_030093 | JCVI_TKOH_00311 | 85.3 | 87.2 / 26.65 | Review |
TkA07G377430 | LXL04_030092 | JCVI_TKOH_00311 | 83.9 | 99.091 / 43.049 | Complex |
TkA07G377460 | LXL04_030091 | JCVI_TKOH_00311 | 95.0 | 100.0 / 100.0 | Complex |
TkA07G378210 | LXL04_030087 | JCVI_TKOH_00311 | 99.0 | 99.365 / 57.643 | Review |
TkA07G379060 | LXL04_030081 | JCVI_TKOH_00311 | 96.9 | 74.648 / 28.086 | Complex |
TkA07G379270 | LXL04_030080 | JCVI_TKOH_00311 | 96.2 | 88.435 / 26.804 | Review |
TkA07G379310 | LXL04_030079 | JCVI_TKOH_00311 | 100.0 | 100.0 / 100.0 | Strict |
TkA07G379320 | LXL04_030077 | JCVI_TKOH_00311 | 99.5 | 100.0 / 100.0 | Strict |
TkA07G379330 | LXL04_030076 | JCVI_TKOH_00311 | 100.0 | 100.0 / 100.0 | Strict |
TkA07G380050 | LXL04_030087 | JCVI_TKOH_00311 | 99.0 | 99.365 / 57.643 | Review |
TkA07G380090 | LXL04_030089 | JCVI_TKOH_00311 | 95.0 | 92.641 / 100.0 | Complex |
TkA07G380380 | LXL04_030091 | JCVI_TKOH_00311 | 94.7 | 100.0 / 100.0 | Complex |