record_type input_id synteny_block_id query_reference target_reference query_gene target_gene query_chr query_start query_end target_chr target_start target_end gene_pair_count identity query_coverage target_coverage reciprocal_best_hit relationship_type confidence orientation note evidence_summary source_table block_summary JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 Chr05 68859415 71469116 Chr04 100354422 102753803 16 High mixed Formal JCVI synteny block from rebuilt ID map pipeline. Formal JCVI synteny block from rebuilt ID map pipeline. synteny_block block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G278520 LXL04_020635 Chr05 68881144 68881758 Chr04 100395552 100399376 100.0 49.51 26.72 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=49.510; tcov=26.720; CDS_RBH=1; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G278530 LXL04_020635 Chr05 68882777 68884310 Chr04 100395552 100399376 97.8 22.167 11.905 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=97.800; qcov=22.167; tcov=11.905; CDS_RBH=0; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G278550 LXL04_020636 Chr05 68886092 68887536 Chr04 100401515 100402714 97.8 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=97.800; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G279400 LXL04_020642 Chr05 69057957 69066397 Chr04 100553263 100554275 100.0 85.915 99.187 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=85.915; tcov=99.187; CDS_RBH=1; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G279420 LXL04_020645 Chr05 69080167 69086078 Chr04 100613387 100619305 80.8 90.244 88.772 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=80.800; qcov=90.244; tcov=88.772; CDS_RBH=1; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G280710 LXL04_020645 Chr05 69345290 69355143 Chr04 100613387 100619305 75.6 100.0 69.825 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=75.600; qcov=100.000; tcov=69.825; CDS_RBH=0; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G282200 LXL04_020647 Chr05 69767527 69769511 Chr04 101203355 101204845 100.0 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G284340 LXL04_020651 Chr05 70209198 70212662 Chr04 101669385 101671787 100.0 84.528 74.419 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=100.000; qcov=84.528; tcov=74.419; CDS_RBH=0; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G285050 LXL04_020652 Chr05 70395101 70395802 Chr04 101846700 101849135 100.0 100.0 28.307 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=28.307; CDS_RBH=1; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G285290 LXL04_020654 Chr05 70470241 70470645 Chr04 101927913 101935150 98.5 100.0 27.917 0 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=98.500; qcov=100.000; tcov=27.917; CDS_RBH=0; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G286310 LXL04_020655 Chr05 70714090 70719595 Chr04 102243131 102248288 52.8 81.915 19.432 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=52.800; qcov=81.915; tcov=19.432; CDS_RBH=0; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G287010 LXL04_020657 Chr05 70878061 70880285 Chr04 102395216 102397113 99.0 100.0 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=99.000; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G287460 LXL04_020655 Chr05 70989183 70994713 Chr04 102243131 102248288 93.9 100.0 68.013 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=93.900; qcov=100.000; tcov=68.013; CDS_RBH=1; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G288160 LXL04_020657 Chr05 71159228 71161601 Chr04 102395216 102397113 100.0 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G288950 LXL04_020661 Chr05 71388911 71389270 Chr04 102686897 102687779 86.3 98.131 78.523 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=86.300; qcov=98.131; tcov=78.523; CDS_RBH=1; JCVI=JCVI_TKOH_00239 id_converter_ready block_anchor JCVI_TKOH_00239 JCVI_TKOH_00239 TK1151 OH1004 TkA05G289240 LXL04_020663 Chr05 71466440 71469116 Chr04 102750042 102753803 97.8 97.713 85.126 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=97.800; qcov=97.713; tcov=85.126; CDS_RBH=1; JCVI=JCVI_TKOH_00239 id_converter_ready