record_type input_id synteny_block_id query_reference target_reference query_gene target_gene query_chr query_start query_end target_chr target_start target_end gene_pair_count identity query_coverage target_coverage reciprocal_best_hit relationship_type confidence orientation note evidence_summary source_table block_summary JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 Chr03 26166774 29220640 Chr02 33699997 36141455 44 High mixed Formal JCVI synteny block from rebuilt ID map pipeline. Formal JCVI synteny block from rebuilt ID map pipeline. synteny_block block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G102250 LXL04_007025 Chr03 26166774 26167204 Chr02 33998585 33999028 71.4 74.107 96.552 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=71.400; qcov=74.107; tcov=96.552; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G103320 LXL04_007013 Chr03 26404868 26405542 Chr02 33703625 33713564 57.1 97.768 28.818 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=57.100; qcov=97.768; tcov=28.818; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G103370 LXL04_007015 Chr03 26423170 26425486 Chr02 33734680 33736736 99.2 100.0 75.155 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.200; qcov=100.000; tcov=75.155; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G103380 LXL04_007016 Chr03 26428013 26428441 Chr02 33739265 33739693 98.6 100.0 100.0 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=98.600; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G103600 LXL04_007017 Chr03 26481111 26486568 Chr02 33773154 33778245 99.8 99.556 55.446 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.800; qcov=99.556; tcov=55.446; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G103720 LXL04_007018 Chr03 26517843 26520302 Chr02 33846152 33847563 99.2 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.200; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G104510 LXL04_007028 Chr03 26752108 26753564 Chr02 34074489 34075941 100.0 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G104570 LXL04_007029 Chr03 26769354 26770226 Chr02 34100075 34101043 94.1 100.0 90.062 1 RBH_sequence_supported Probable category=probable_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=94.100; qcov=100.000; tcov=90.062; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G104760 LXL04_007031 Chr03 26802754 26805178 Chr02 34133158 34135419 98.9 94.906 96.477 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=98.900; qcov=94.906; tcov=96.477; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G105100 LXL04_007034 Chr03 26879649 26882231 Chr02 34175506 34178088 99.7 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G105130 LXL04_007035 Chr03 26888796 26889786 Chr02 34184675 34185665 100.0 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G105150 LXL04_007036 Chr03 26894150 26894866 Chr02 34190783 34191184 100.0 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G105170 LXL04_007037 Chr03 26898726 26899709 Chr02 34195184 34196167 72.8 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=72.800; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G105280 LXL04_007038 Chr03 26933552 26940023 Chr02 34208821 34214813 99.3 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.300; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G105290 LXL04_007039 Chr03 26940840 26943813 Chr02 34216241 34218903 83.1 100.0 99.329 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=83.100; qcov=100.000; tcov=99.329; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G105330 LXL04_007041 Chr03 26965704 26967241 Chr02 34246354 34247168 99.4 100.0 90.955 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.400; qcov=100.000; tcov=90.955; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G105380 LXL04_007043 Chr03 26991532 26991840 Chr02 34269693 34270001 100.0 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G105500 LXL04_007044 Chr03 27028137 27028586 Chr02 34308806 34309255 100.0 100.0 100.0 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G105510 LXL04_007045 Chr03 27030249 27033361 Chr02 34311512 34313785 94.6 100.0 68.21 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=94.600; qcov=100.000; tcov=68.210; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G105760 LXL04_007047 Chr03 27082206 27089291 Chr02 34372270 34377693 99.8 100.0 90.235 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.800; qcov=100.000; tcov=90.235; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G105770 LXL04_007049 Chr03 27084110 27086117 Chr02 34378110 34379649 98.4 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=98.400; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G105930 LXL04_007050 Chr03 27125341 27132228 Chr02 34392054 34398335 92.5 98.107 50.847 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=92.500; qcov=98.107; tcov=50.847; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G106500 LXL04_007052 Chr03 27266127 27266438 Chr02 34406632 34406919 35.6 87.379 92.632 0 multi_candidate_from_TK1151 Complex category=one_to_many; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=35.600; qcov=87.379; tcov=92.632; CDS_RBH=0; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G107030 LXL04_007056 Chr03 27383594 27383980 Chr02 34615181 34615564 96.9 100.0 100.0 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=96.900; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G107340 LXL04_007060 Chr03 27465302 27465893 Chr02 34768831 34769433 97.2 60.335 54.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=97.200; qcov=60.335; tcov=54.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G107880 LXL04_007061 Chr03 27582372 27582890 Chr02 34931289 34931843 88.6 100.0 100.0 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=88.600; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G108120 LXL04_007062 Chr03 27678980 27691104 Chr02 34968648 34978505 76.7 97.222 66.85 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=76.700; qcov=97.222; tcov=66.850; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G108640 LXL04_007066 Chr03 27808098 27810217 Chr02 35089102 35100167 100.0 99.647 28.659 0 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=100.000; qcov=99.647; tcov=28.659; CDS_RBH=0; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G108650 LXL04_007066 Chr03 27811683 27815490 Chr02 35089102 35100167 98.8 99.701 67.785 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=98.800; qcov=99.701; tcov=67.785; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G108830 LXL04_007070 Chr03 27859870 27860304 Chr02 35166616 35167050 96.5 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=96.500; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G111300 LXL04_007074 Chr03 28467760 28468530 Chr02 35295710 35296480 87.1 100.0 100.0 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=87.100; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G111400 LXL04_007077 Chr03 28491381 28493090 Chr02 35323331 35324543 99.6 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.600; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G111410 LXL04_007078 Chr03 28493791 28494444 Chr02 35325422 35326075 97.7 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=97.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G111960 LXL04_007082 Chr03 28644644 28646055 Chr02 35490727 35491849 100.0 100.0 100.0 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G112170 LXL04_007082 Chr03 28708281 28709785 Chr02 35490727 35491849 99.4 100.0 100.0 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=99.400; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G112250 LXL04_007085 Chr03 28721357 28721923 Chr02 35559240 35559928 100.0 100.0 84.783 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=84.783; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G112890 LXL04_007086 Chr03 28898948 28900248 Chr02 35737453 35738374 100.0 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G113220 LXL04_007088 Chr03 28972232 28972753 Chr02 35803812 35815608 68.6 85.549 11.237 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=68.600; qcov=85.549; tcov=11.237; CDS_RBH=0; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G113260 LXL04_007088 Chr03 28976585 28982656 Chr02 35803812 35815608 95.5 100.0 36.727 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=95.500; qcov=100.000; tcov=36.727; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G113280 LXL04_007090 Chr03 28985671 28988499 Chr02 35826765 35828687 96.1 100.0 100.0 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=96.100; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G113760 LXL04_007098 Chr03 29135701 29136659 Chr02 36052110 36053154 62.2 85.714 93.411 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=62.200; qcov=85.714; tcov=93.411; CDS_RBH=0; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G113790 LXL04_007099 Chr03 29148715 29151247 Chr02 36064369 36066521 99.3 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.300; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G113990 LXL04_007101 Chr03 29212231 29212655 Chr02 36133161 36133585 100.0 100.0 100.0 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready block_anchor JCVI_TKOH_00128 JCVI_TKOH_00128 TK1151 OH1004 TkA03G114020 LXL04_007102 Chr03 29219069 29220640 Chr02 36140500 36141455 99.2 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.200; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00128 id_converter_ready