Subcellular Localization

LocPro localization results for the two rubber dandelion protein FASTA sets, TK1151 and OH-1004; displayed data follow the input ID version.

Examples TkA01G624900 LXL04_000258

Dual-reference IDs

Input ID TkA04G109490

TK1151 ID TkA04G109490

OH-1004 ID LXL04_035776

Main locations use complete ESM2 + PROFEAT features and probability calibration against independent experimentally annotated reference proteins. This is not experimental localization in rubber dandelion. Multiple locations are supported, so probabilities need not sum to one. Detailed-location scores remain uncalibrated and are shown separately.

Calibration method and independent validation metrics

Search Results

Download calibrated main-location results

Top1 predicted location Endoplasmic reticulum

Top1 probability (benchmark calibrated) 0.803

Gene ID TkA04G109490

Data version TK1151

ModelLocPro

Model downloadLocPro model folder

PaperYintao Zhang et al. LocPro: A deep learning-based prediction of protein subcellular localization for promoting multi-directional pharmaceutical research. J Pharm Anal. 2025. doi:10.1016/j.jpha.2025.101255

Endoplasmic reticulum0.803

Rank 1 · TkA04G109490 · TK1151

Cytoplasm0.131

Rank 2 · TkA04G109490 · TK1151

Nucleus0.094

Rank 3 · TkA04G109490 · TK1151

Golgi apparatus0.085

Rank 4 · TkA04G109490 · TK1151

Cell membrane0.063

Rank 5 · TkA04G109490 · TK1151

Detailed locations (uncalibrated model scores)

These scores support exploratory ranking and must not be interpreted as localization probabilities. The model contains cross-species categories; these outputs do not establish the corresponding structures or localization in rubber dandelion.

Location	Raw score
Endoplasmic reticulum	0.637
Endoplasmic reticulum lumen	0.320
Endoplasmic reticulum membrane	0.317
Golgi apparatus	0.177
Secreted	0.169