Subcellular Localization

LocPro localization results for the two rubber dandelion protein FASTA sets, TK1151 and OH-1004; displayed data follow the input ID version.

Examples TkA01G624900 LXL04_000258

Dual-reference IDs

Input ID TkA05G223940

TK1151 ID TkA05G223940

OH-1004 ID LXL04_030234

Main locations use complete ESM2 + PROFEAT features and probability calibration against independent experimentally annotated reference proteins. This is not experimental localization in rubber dandelion. Multiple locations are supported, so probabilities need not sum to one. Detailed-location scores remain uncalibrated and are shown separately.

Calibration method and independent validation metrics

Search Results

Download calibrated main-location results

Top1 predicted location Cytoplasm

Top1 probability (benchmark calibrated) 0.589

Gene ID TkA05G223940

Data version TK1151

ModelLocPro

Model downloadLocPro model folder

PaperYintao Zhang et al. LocPro: A deep learning-based prediction of protein subcellular localization for promoting multi-directional pharmaceutical research. J Pharm Anal. 2025. doi:10.1016/j.jpha.2025.101255

Cytoplasm0.589

Rank 1 · TkA05G223940 · TK1151

Nucleus0.338

Rank 2 · TkA05G223940 · TK1151

Mitochondrion0.089

Rank 3 · TkA05G223940 · TK1151

Cell membrane0.073

Rank 4 · TkA05G223940 · TK1151

Endoplasmic reticulum0.037

Rank 5 · TkA05G223940 · TK1151

Detailed locations (uncalibrated model scores)

These scores support exploratory ranking and must not be interpreted as localization probabilities. The model contains cross-species categories; these outputs do not establish the corresponding structures or localization in rubber dandelion.

Location	Raw score
Cytoplasm	0.456
Nucleus	0.402
Chromosome	0.176
Cytoplasmic granule	0.171
Mitochondrion	0.164