Subcellular Localization

LocPro localization results for the two rubber dandelion protein FASTA sets, TK1151 and OH-1004; displayed data follow the input ID version.

Examples TkA01G624900 LXL04_000258

Dual-reference IDs

Input ID LXL04_002639

TK1151 ID TkA01G433800

OH-1004 ID LXL04_002639

Main locations use complete ESM2 + PROFEAT features and probability calibration against independent experimentally annotated reference proteins. This is not experimental localization in rubber dandelion. Multiple locations are supported, so probabilities need not sum to one. Detailed-location scores remain uncalibrated and are shown separately.

Calibration method and independent validation metrics

Search Results

Download calibrated main-location results

Top1 predicted location Plastid

Top1 probability (benchmark calibrated) 0.978

Gene ID LXL04_002639

Data version OH-1004

ModelLocPro

Model downloadLocPro model folder

PaperYintao Zhang et al. LocPro: A deep learning-based prediction of protein subcellular localization for promoting multi-directional pharmaceutical research. J Pharm Anal. 2025. doi:10.1016/j.jpha.2025.101255

Plastid0.978

Rank 1 · LXL04_002639 · OH-1004

Mitochondrion0.031

Rank 2 · LXL04_002639 · OH-1004

Cytoplasm0.017

Rank 3 · LXL04_002639 · OH-1004

Cell membrane0.014

Rank 4 · LXL04_002639 · OH-1004

Nucleus0.013

Rank 5 · LXL04_002639 · OH-1004

Detailed locations (uncalibrated model scores)

These scores support exploratory ranking and must not be interpreted as localization probabilities. The model contains cross-species categories; these outputs do not establish the corresponding structures or localization in rubber dandelion.

Location	Raw score
Chloroplast	0.847
Chloroplast thylakoid	0.350
Chloroplast membrane	0.341
Chloroplast thylakoid membrane	0.299
Chloroplast stroma	0.271