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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G285950
Reference: TK1151 Chr: Chr08 Coordinates: 74228288-74234712 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3680 bp · TkA08G285950|TK1151|cDNA

GTGTTCATCGGGCAGGTGTGCCCGACCACCCCACCCCCTGCCTCTTCCCCCTCTACCCCGGACCGCGAGGCGGCGAGGGTGACCATTACAGAAGTCCCATAACGTTAAGGTCCTCCCAATCCTCCCAAGGTATTTCGCGGGCTCCTCCCCCTCCCCCCTCTCTCAGCGAAGAAAATGAACCACAAAAACCTCTCGTCATCTCGCAGCTGTTGCATTTCACACGAATTCTACAAATCGGCTTCCAAAAACCCTACTAAAAT...

CDS

Download CDS FASTA

3330 bp · TkA08G285950|TK1151|CDS

ATGAACCACAAAAACCTCTCGTCATCTCGCAGCTGTTGCATTTCACACGAATTCTACAAATCGGCTTCCAAAAACCCTACTAAAATCGCAGTGATCCATGCTTCCCCACGCCGCCGTACCAAATCCACCACTGAAACTGACCCGTTCATTGAGACGTCACCGTCTCATCATCATCCTCCGGTGTACGAAGGCGACGTATGCTTCACTTATTCGGAAATTCTAGAAGCGGTAGATTCCCTTAGCCGTCGTCTGCGGTTCAT...

Protein

Download Protein FASTA

1109 aa · TkA08G285950|TK1151|PROTEIN

MNHKNLSSSRSCCISHEFYKSASKNPTKIAVIHASPRRRTKSTTETDPFIETSPSHHHPPVYEGDVCFTYSEILEAVDSLSRRLRFILDGGADQHLIRPSPRPLPIDQSANTPKIVGIYMVPSVEYIISVLSVIRCGAAFMPLDPSWPKERVLSVVSSSTSKLILCSSTSFDGNNTQKINKHHWSVDAGSCPVLEVSMKTNLNHHFSSPSLLWPCENKKLRPFCYLMYTSGSTGIPKGVCGTEQGLLNRFIWMQDTYPLY...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G285950
TK1151 IDTkA08G285950
OH-1004 IDLXL04_033616
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)97.600
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G285950
LocationChr08:74228288-74234712 (+)
DescriptionSimilar to At5g35930: Putative acyl-activating enzyme 19
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g35930 Putative acyl-activating enzyme 19. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_033616 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006631 fatty acid metabolic process Biological Process
GO:0008610 lipid biosynthetic process Biological Process
GO:0017000 antibiotic biosynthetic process Biological Process
GO:0019482 beta-alanine metabolic process Biological Process
GO:0043041 amino acid activation for nonribosomal peptide biosynthetic process Biological Process
GO:0044550 secondary metabolite biosynthetic process Biological Process
GO:0005739 mitochondrion Cellular Component
GO:0005829 cytosol Cellular Component
GO:0005524 ATP binding Molecular Function
GO:0016740 transferase activity Molecular Function
GO:0016874 ligase activity Molecular Function
GO:0031177 phosphopantetheine binding Molecular Function
KEGG gene cross-reference
ath:AT5G35930
hsa:132949
mmu:231326
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.441
Rank 1 · TkA08G285950 · TK1151
Nucleus0.413
Rank 2 · TkA08G285950 · TK1151
Endoplasmic reticulum0.075
Rank 3 · TkA08G285950 · TK1151
Cell membrane0.072
Rank 4 · TkA08G285950 · TK1151
Plastid0.068
Rank 5 · TkA08G285950 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF12423KIF1B42-57 aa
PF00501AMP-binding64-85 aa
PF00077RVP83-126 aa
PF00501AMP-binding115-433 aa
PF12423KIF1B246-266 aa
PF13193AMP-binding_C507-577 aa
PF00550PP-binding610-648 aa
PF13360PQQ_2764-886 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G285950PF12423KIF1B42570.1612.9
TkA08G285950PF00501AMP-binding64853.3e-46158.5
TkA08G285950PF00077RVP831260.2412.4
TkA08G285950PF00501AMP-binding1154333.3e-46158.5
TkA08G285950PF12423KIF1B2462660.1612.9
TkA08G285950PF13193AMP-binding_C5075770.0001523.4
TkA08G285950PF00550PP-binding6106480.0001722.5
TkA08G285950PF13360PQQ_27648861.3e-1661.7
TkA08G285950PF13570Beta-prop_ACSF477011073.4e-97326.5
TkA08G285950PF23414Beta-prop_EML_27968904.3e-0627.0
TkA08G285950PF25293Beta-prop_EMC1_N8038532.3e-0524.7
TkA08G285950PF25292Beta-prop_CGLA8048870.0005220.3
TkA08G285950PF08394Arc_trans_TRASH8558660.007817.0
TkA08G285950PF08394Arc_trans_TRASH8989270.007817.0
TkA08G285950PF13360PQQ_293610961.3e-1661.7
TkA08G285950PF25292Beta-prop_CGLA96510330.0005220.3

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
F4K1G2Arabidopsis thalianasp|F4K1G2|AEE19_ARATH Putative acyl-activating enzyme 1943.900%Swiss-ProtMedium

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