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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA03G187120
Reference: TK1151 Chr: Chr03 Coordinates: 47121722-47122890 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

870 bp · TkA03G187120|TK1151|cDNA

ATGACGAAACCTCGAGTGACAGACCAAATCAAATTTCTTCCAAAGAGAATAATATTGGTCCGCCATGGCGAGAGTGAAGGTAATATCGATAGCTCCGCCTATTCCACCACCCCCGATTACAAGATCCCACTTACCAAACAAGGAATGGCACAGGCAAAGCTCGCCGGAGCTCAGATCCGAACTGTCATCTCAGACTCCGGCTCCACAGATAATTGGAAGGTTTACTTTTACGTTTCACCTTACGCCCGATCCAGATCGAG...

870 bp · TkA03G187120|TK1151|CDS

ATGACGAAACCTCGAGTGACAGACCAAATCAAATTTCTTCCAAAGAGAATAATATTGGTCCGCCATGGCGAGAGTGAAGGTAATATCGATAGCTCCGCCTATTCCACCACCCCCGATTACAAGATCCCACTTACCAAACAAGGAATGGCACAGGCAAAGCTCGCCGGAGCTCAGATCCGAACTGTCATCTCAGACTCCGGCTCCACAGATAATTGGAAGGTTTACTTTTACGTTTCACCTTACGCCCGATCCAGATCGAG...

289 aa · TkA03G187120|TK1151|PROTEIN

MTKPRVTDQIKFLPKRIILVRHGESEGNIDSSAYSTTPDYKIPLTKQGMAQAKLAGAQIRTVISDSGSTDNWKVYFYVSPYARSRSSLREIGRSFPKKSVIGVREECRIREQDFGNFQITERMKIIKETRERFGRFFYRMPEGESAADVYDRVSIFLESFRLDIDMNRLKHDPSTDLNLIIVSHGLASRVFLMKCFKWTVEQFERLNNLNNCEFRILQFGPRGESNRLGFSTIYPSLRQHFLVQKWGAAGDESRSIANPS...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G187120
TK1151 IDTkA03G187120
OH-1004 IDLXL04_007532
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)83.400
Protein coverage (%)TK1151 98.962 / OH-1004 95.563
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G187120
LocationChr03:47121722-47122890 (+)
DescriptionSimilar to At3g05170: Phosphoglycerate mutase-like protein AT74
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g08940 May play a role in carbohydrates metabolism. No verified direct reference in this release
At3g05170 Phosphoglycerate mutase-like protein lacking PGM activity. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_007532 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0005975 carbohydrate metabolic process Biological Process
GO:0032366 intracellular sterol transport Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0003993 acid phosphatase activity Molecular Function
GO:0016791 phosphatase activity Molecular Function
KEGG gene cross-reference
ath:AT1G08940
ath:AT3G05170
sce:YDR051C
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.463
Rank 1 · TkA03G187120 · TK1151
Nucleus0.318
Rank 2 · TkA03G187120 · TK1151
Mitochondrion0.185
Rank 3 · TkA03G187120 · TK1151
Peroxisome0.059
Rank 4 · TkA03G187120 · TK1151
Cell membrane0.055
Rank 5 · TkA03G187120 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00300His_Phos_117-223 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G187120PF00300His_Phos_1172237.6e-2588.5

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
O04035Arabidopsis thalianasp|O04035|AT74H_ARATH Phosphoglycerate mutase-like protein AT74H68.500%Swiss-ProtHigh
Q9MAA2Arabidopsis thalianasp|Q9MAA2|AT74_ARATH Phosphoglycerate mutase-like protein AT7459.900%Swiss-ProtHigh

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