Gene Card
Gene overview
cDNA / CDS / Protein Sequences
564 bp · TkA02G573270|TK1151|cDNA
ATGCCAGCTCGCCTCCGCAGGCCCAGGTGGACCCAGTTCCACCGCCACGTCATCAGATCCAAACGGGAGGAAAATATTTGTGGCAAATGTCGGGTCCCACGTGAACCCGAACACCCTTCGACAATTGACGGGAGTAGAAAGGCTTTGGAGGAACCAAACAAGGTTTTTGACGGGTGTCGGTTGGAGTGCAGACAGGCGGTTGACGGTCAACGTGGGAATAAAAGTAATAAAAAAATGCAAATGGGAAACGTGCAGCAAAG...
564 bp · TkA02G573270|TK1151|CDS
ATGCCAGCTCGCCTCCGCAGGCCCAGGTGGACCCAGTTCCACCGCCACGTCATCAGATCCAAACGGGAGGAAAATATTTGTGGCAAATGTCGGGTCCCACGTGAACCCGAACACCCTTCGACAATTGACGGGAGTAGAAAGGCTTTGGAGGAACCAAACAAGGTTTTTGACGGGTGTCGGTTGGAGTGCAGACAGGCGGTTGACGGTCAACGTGGGAATAAAAGTAATAAAAAAATGCAAATGGGAAACGTGCAGCAAAG...
Protein
Download Protein FASTA187 aa · TkA02G573270|TK1151|PROTEIN
MPARLRRPRWTQFHRHVIRSKREENICGKCRVPREPEHPSTIDGSRKALEEPNKVFDGCRLECRQAVDGQRGNKSNKKMQMGNVQQSEIGNVGYGGYGGVYAPQIMNMVGGNPMLVPQSFGYRVNTVGSNMVAGYGSQLGLQGLGGTRVILLRWDGRQVAQRQHCQLGNSLGLGLWVPVFLRTLVGS
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA02G573270 |
|---|---|
| TK1151 ID | TkA02G573270 |
| OH-1004 ID | LXL04_012285 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 92.500 |
| Protein coverage (%) | TK1151 56.684 / OH-1004 19.168Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA02G573270 |
|---|---|
| Location | Chr02:148056831-148057491 (+) |
| Description | Similar to UBA2B: UBP1-associated protein 2B |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006952 defense response Biological Process GO:0009693 ethylene biosynthetic process Biological Process GO:0009738 abscisic acid-activated signaling pathway Biological Process GO:0010150 leaf senescence Biological Process GO:0012501 programmed cell death Biological Process GO:0048255 mRNA stabilization Biological Process GO:0051028 mRNA transport Biological Process GO:0005634 nucleus Cellular Component GO:0005730 nucleolus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0003729 mRNA binding Molecular Function GO:0035925 mRNA 3'-UTR AU-rich region binding Molecular Function |
| KEGG gene cross-reference | ath:AT2G22090 ath:AT2G41060 ath:AT3G15010 ath:AT3G56860 dosa:Os01g0265800 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.