Gene Card
Gene overview
cDNA / CDS / Protein Sequences
864 bp · LXL04_030723|LXL04_030723|OH1004|cDNA
ATGCATTCGGTAAGCTTAAAGTTGTTTGTGGATTTCAACGATGTCAAATCGAGGCATACGATGCCAAGTCAGGTTAGTTTTGGTGCGGGAGAACCTCCGGTTAGGTTGAATTTCGGAGATCAAGGGAGGAGGAGCTGTAGAATCGTTGCGCATGCTTCGGAGAGAGATGCCGGTGCTGGTGCCGGGGCTGAGGCTGGTGAGAGTCAGCAAAATAAGAGCTCGTTTTTCGCACGGAGTCAAACTTACGCTTTGATGAAACA...
864 bp · LXL04_030723|LXL04_030723|OH1004|CDS
ATGCATTCGGTAAGCTTAAAGTTGTTTGTGGATTTCAACGATGTCAAATCGAGGCATACGATGCCAAGTCAGGTTAGTTTTGGTGCGGGAGAACCTCCGGTTAGGTTGAATTTCGGAGATCAAGGGAGGAGGAGCTGTAGAATCGTTGCGCATGCTTCGGAGAGAGATGCCGGTGCTGGTGCCGGGGCTGAGGCTGGTGAGAGTCAGCAAAATAAGAGCTCGTTTTTCGCACGGAGTCAAACTTACGCTTTGATGAAACA...
Protein
Download Protein FASTA287 aa · LXL04_030723|LXL04_030723|OH1004|PROTEIN
MHSVSLKLFVDFNDVKSRHTMPSQVSFGAGEPPVRLNFGDQGRRSCRIVAHASERDAGAGAGAEAGESQQNKSSFFARSQTYALMKQQMELAAKSENFEEAARLRDSLKSFEEEEPVLRLRGLMKEAIANENFEDAARYRDQIKQIAPHYLLKCSSDATTLGIRVQVRSVYIEGRSQPLRGQYFFAYRIRITNNSNRPVQLLKRHWIITNANEKSEDVWGIGVIGEQPVILPNNSFEYSSACPLTTPSGRMEGDFEMKHI...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_030723 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_030723 |
|---|---|
| Location | Chr06:121434265-121435589 (+) |
| Description | Similar to apaG: Protein ApaG (Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0070987 error-free translesion synthesis Biological Process |
| KEGG gene cross-reference | atu:Atu0431 bcs:BCAN_A0310 bmt:BSUIS_A0330 mag:amb4224 mmr:Mmar10_0491 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF02151.26UVR85-113 aaPF02151.26UVR120-146 aaPF04379.21DUF525175-258 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_030723 | PF02151.26 | UVR | 85 | 113 | 4.2e-17 | 62.0 |
| LXL04_030723 | PF02151.26 | UVR | 120 | 146 | 4.2e-17 | 62.0 |
| LXL04_030723 | PF04379.21 | DUF525 | 175 | 258 | 5.7e-33 | 113.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.