Gene Card
Gene overview
cDNA / CDS / Protein Sequences
792 bp · LXL04_013194|LXL04_013194|OH1004|cDNA
ATGGCTGCAAAGAAGGTTTTGCTCACCGTCAACGGTGATGAGGTTTCTCGAAACATCGCTTATCATTTAGCCAAACGCGGCTGCAGATTGGTGTTGATGGGAGACGAGAAGGTTCTCAAGGGTATTGCTGATTGGATTAGCAACGATCTCAAGGGGGTAACGCTTGAAATCGTTGGATTAGATATGGAAGACGAGAGAGAGTCGATTTTCGATGAAGCCGTGGAGAAAACGTGGAGTATTTTAGGGAAAGTGGATGCTCT...
792 bp · LXL04_013194|LXL04_013194|OH1004|CDS
ATGGCTGCAAAGAAGGTTTTGCTCACCGTCAACGGTGATGAGGTTTCTCGAAACATCGCTTATCATTTAGCCAAACGCGGCTGCAGATTGGTGTTGATGGGAGACGAGAAGGTTCTCAAGGGTATTGCTGATTGGATTAGCAACGATCTCAAGGGGGTAACGCTTGAAATCGTTGGATTAGATATGGAAGACGAGAGAGAGTCGATTTTCGATGAAGCCGTGGAGAAAACGTGGAGTATTTTAGGGAAAGTGGATGCTCT...
Protein
Download Protein FASTA263 aa · LXL04_013194|LXL04_013194|OH1004|PROTEIN
MAAKKVLLTVNGDEVSRNIAYHLAKRGCRLVLMGDEKVLKGIADWISNDLKGVTLEIVGLDMEDERESIFDEAVEKTWSILGKVDALVNCYTYEGKMQDPLQVSEAEFKKTVRINFMAAWYLLKAVAKRMRDNKSGGSIVFMTSIIGAERGIYPGAAAYGACLGGVHQLVRTSAMEVGKHQIRVNAIARGLHINDEFPVSVGKERAEKLVKDANPLHRWLDPKDDLASTVIYLVSDDSRYMTGTTIYVDGAQSVVRPRMR...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_013194 |
|---|---|
| TK1151 ID | TkA02G512850 |
| OH-1004 ID | LXL04_013194 |
| Relationship / confidence | Multi Candidate From Tk1151 / Complex relationship |
| Protein identity (%) | 99.200 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_013194 |
|---|---|
| Location | Chr03:25799431-25800468 (+) |
| Description | Similar to lvr: Levodione reductase |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0005997 xylulose metabolic process Biological Process GO:0006006 glucose metabolic process Biological Process GO:0030497 fatty acid elongation Biological Process GO:0005759 mitochondrial matrix Cellular Component GO:0004090 carbonyl reductase (NADPH) activity Molecular Function GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity Molecular Function GO:0016491 oxidoreductase activity Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Molecular Function GO:0050038 L-xylulose reductase (NADPH) activity Molecular Function GO:0050661 NADP binding Molecular Function GO:0051287 NAD binding Molecular Function |
| KEGG gene cross-reference | bsu:BSU15910 sep:SE_0906 ser:SERP0797 ssc:396780 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00106.32adh_short6-190 aaPF13561.13adh_short_C216-250 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_013194 | PF00106.32 | adh_short | 6 | 190 | 1e-26 | 94.4 |
| LXL04_013194 | PF13561.13 | adh_short_C2 | 16 | 250 | 3e-39 | 135.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.