Proteomics query

Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.

3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates

Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.

Examples

Transcript expression query

Download selected abundance datasets and queried genes (TSV) · 144 abundance records

Root proteomes of latex-exuding and non-exuding plants · LFQ intensity

Source accession: PRIDE PXD011773
Paper: View study design
Samples and quantification: 36 LFQ experiments · 9040 protein groups · MaxQuant
Species: Rubber dandelion (Taraxacum koksaghyz)
Sample tissue/type: Root tissue (whole-root protein extract)
Treatment/comparison: Compare latex-exuding controls, latex-exuding barstar controls and non-exuding barnase/barstar plants at three developmental ages.
Sampling age: 8, 12 and 24 weeks old
Groups and replicates: Four biological replicates per age and genotype: 3 genotypes x 3 ages x 4 replicates = 36 quantified samples.
Material/groupGroup meaning
Latex-exuding controlLatex-exuding background control; archived as WT.
Latex-exuding transgenic controlBarstar-only transgenic control that exudes latex.
Non-exuding lineBarnase/barstar double-transgenic plants that do not exude latex.

LFQ quantification is at the protein-group level. Cross-version gene mappings retain evidence tiers and do not establish unique protein identification. Source zeros are retained and do not establish protein absence.

ID Resolution

Input IDDisplay IDLinked lookup IDProtein groupsValuesStatus
TkAUNG044090TkAUNG044090LXL04_015427502, 8851, 4067, 58144Resolved

Group Summary

Download current dataset and queried genes (TSV)

Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.

TkAUNG044090 · 8 weeks old Latex-exuding control · Group 5024.21e+09
TkAUNG044090 · 8 weeks old Latex-exuding transgenic control · Group 5023.61e+09
TkAUNG044090 · 8 weeks old Non-exuding line · Group 5023.85e+09
TkAUNG044090 · 12 weeks old Latex-exuding control · Group 5023.5e+09
TkAUNG044090 · 12 weeks old Latex-exuding transgenic control · Group 5023.71e+09
TkAUNG044090 · 12 weeks old Non-exuding line · Group 5023.61e+09
TkAUNG044090 · 24 weeks old Latex-exuding control · Group 5023.66e+09
TkAUNG044090 · 24 weeks old Latex-exuding transgenic control · Group 5023.33e+09
TkAUNG044090 · 24 weeks old Non-exuding line · Group 5022.5e+09
TkAUNG044090 · 8 weeks old Latex-exuding control · Group 88511.5e+09
TkAUNG044090 · 8 weeks old Latex-exuding transgenic control · Group 88511.38e+09
TkAUNG044090 · 8 weeks old Non-exuding line · Group 88511.39e+09
TkAUNG044090 · 12 weeks old Latex-exuding control · Group 88511.21e+09
TkAUNG044090 · 12 weeks old Latex-exuding transgenic control · Group 88511.19e+09
TkAUNG044090 · 12 weeks old Non-exuding line · Group 88511.13e+09
TkAUNG044090 · 24 weeks old Latex-exuding control · Group 88517.38e+08
TkAUNG044090 · 24 weeks old Latex-exuding transgenic control · Group 88517.54e+08
TkAUNG044090 · 24 weeks old Non-exuding line · Group 88518.42e+08
TkAUNG044090 · 8 weeks old Latex-exuding control · Group 40671.56e+09
TkAUNG044090 · 8 weeks old Latex-exuding transgenic control · Group 40671.48e+09
TkAUNG044090 · 8 weeks old Non-exuding line · Group 40671.65e+09
TkAUNG044090 · 12 weeks old Latex-exuding control · Group 40671.25e+09
TkAUNG044090 · 12 weeks old Latex-exuding transgenic control · Group 40671.27e+09
TkAUNG044090 · 12 weeks old Non-exuding line · Group 40671.29e+09
TkAUNG044090 · 24 weeks old Latex-exuding control · Group 40679.09e+08
TkAUNG044090 · 24 weeks old Latex-exuding transgenic control · Group 40671.11e+09
TkAUNG044090 · 24 weeks old Non-exuding line · Group 40671.21e+09
TkAUNG044090 · 8 weeks old Latex-exuding control · Group 581.6e+08
TkAUNG044090 · 8 weeks old Latex-exuding transgenic control · Group 581.49e+08
TkAUNG044090 · 8 weeks old Non-exuding line · Group 582.49e+08
TkAUNG044090 · 12 weeks old Latex-exuding control · Group 581.32e+08
TkAUNG044090 · 12 weeks old Latex-exuding transgenic control · Group 581.05e+08
TkAUNG044090 · 12 weeks old Non-exuding line · Group 588.62e+07
TkAUNG044090 · 24 weeks old Latex-exuding control · Group 587.19e+07
TkAUNG044090 · 24 weeks old Latex-exuding transgenic control · Group 586.87e+07
TkAUNG044090 · 24 weeks old Non-exuding line · Group 586.01e+07
Gene / protein IDProtein groupTissue/sampleMaterial/groupSampling ageMean intensitySDSEnUnit
TkAUNG044090502Root tissue (whole-root protein extract)Latex-exuding control8 weeks old4.20552e+094.62227e+082.31114e+084LFQ intensity
TkAUNG044090502Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks old3.61175e+093.83817e+081.91908e+084LFQ intensity
TkAUNG044090502Root tissue (whole-root protein extract)Non-exuding line8 weeks old3.84708e+093.9057e+081.95285e+084LFQ intensity
TkAUNG044090502Root tissue (whole-root protein extract)Latex-exuding control12 weeks old3.5031e+093.96182e+081.98091e+084LFQ intensity
TkAUNG044090502Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks old3.71128e+093.92011e+081.96006e+084LFQ intensity
TkAUNG044090502Root tissue (whole-root protein extract)Non-exuding line12 weeks old3.60922e+092.51815e+081.25907e+084LFQ intensity
TkAUNG044090502Root tissue (whole-root protein extract)Latex-exuding control24 weeks old3.65542e+094.71638e+082.35819e+084LFQ intensity
TkAUNG044090502Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks old3.32518e+095.93045e+082.96523e+084LFQ intensity
TkAUNG044090502Root tissue (whole-root protein extract)Non-exuding line24 weeks old2.50135e+092.65275e+081.32637e+084LFQ intensity
TkAUNG0440908851Root tissue (whole-root protein extract)Latex-exuding control8 weeks old1.49822e+091.49112e+087.45559e+074LFQ intensity
TkAUNG0440908851Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks old1.37992e+092.72121e+081.3606e+084LFQ intensity
TkAUNG0440908851Root tissue (whole-root protein extract)Non-exuding line8 weeks old1.38765e+091.06872e+085.3436e+074LFQ intensity
TkAUNG0440908851Root tissue (whole-root protein extract)Latex-exuding control12 weeks old1.2093e+091.43476e+087.17378e+074LFQ intensity
TkAUNG0440908851Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks old1.18549e+092.29189e+081.14595e+084LFQ intensity
TkAUNG0440908851Root tissue (whole-root protein extract)Non-exuding line12 weeks old1.13492e+095.63955e+072.81977e+074LFQ intensity
TkAUNG0440908851Root tissue (whole-root protein extract)Latex-exuding control24 weeks old7.3777e+081.1993e+085.99648e+074LFQ intensity
TkAUNG0440908851Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks old7.53668e+082.60961e+081.30481e+084LFQ intensity
TkAUNG0440908851Root tissue (whole-root protein extract)Non-exuding line24 weeks old8.42398e+083.16832e+081.58416e+084LFQ intensity
TkAUNG0440904067Root tissue (whole-root protein extract)Latex-exuding control8 weeks old1.55732e+092.64741e+081.3237e+084LFQ intensity
TkAUNG0440904067Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks old1.47645e+091.04312e+085.21558e+074LFQ intensity
TkAUNG0440904067Root tissue (whole-root protein extract)Non-exuding line8 weeks old1.65272e+093.3591e+081.67955e+084LFQ intensity
TkAUNG0440904067Root tissue (whole-root protein extract)Latex-exuding control12 weeks old1.24952e+092.67839e+071.33919e+074LFQ intensity
TkAUNG0440904067Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks old1.26938e+092.10582e+081.05291e+084LFQ intensity
TkAUNG0440904067Root tissue (whole-root protein extract)Non-exuding line12 weeks old1.28535e+097.27432e+073.63716e+074LFQ intensity
TkAUNG0440904067Root tissue (whole-root protein extract)Latex-exuding control24 weeks old9.09175e+081.0493e+085.24649e+074LFQ intensity
TkAUNG0440904067Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks old1.11043e+091.20153e+086.00764e+074LFQ intensity
TkAUNG0440904067Root tissue (whole-root protein extract)Non-exuding line24 weeks old1.20742e+091.5752e+087.87598e+074LFQ intensity
TkAUNG04409058Root tissue (whole-root protein extract)Latex-exuding control8 weeks old1.59905e+082.2688e+071.1344e+074LFQ intensity
TkAUNG04409058Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks old1.48822e+082.68127e+071.34064e+074LFQ intensity
TkAUNG04409058Root tissue (whole-root protein extract)Non-exuding line8 weeks old2.48642e+087.51607e+073.75803e+074LFQ intensity
TkAUNG04409058Root tissue (whole-root protein extract)Latex-exuding control12 weeks old1.32298e+083.51163e+071.75581e+074LFQ intensity
TkAUNG04409058Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks old1.04851e+082.92669e+071.46335e+074LFQ intensity
TkAUNG04409058Root tissue (whole-root protein extract)Non-exuding line12 weeks old8.61902e+071.83073e+079.15365e+064LFQ intensity
TkAUNG04409058Root tissue (whole-root protein extract)Latex-exuding control24 weeks old7.19288e+072.34387e+071.17193e+074LFQ intensity
TkAUNG04409058Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks old6.86882e+072.98722e+071.49361e+074LFQ intensity
TkAUNG04409058Root tissue (whole-root protein extract)Non-exuding line24 weeks old6.00815e+073.21132e+071.60566e+074LFQ intensity

Sample-Level Protein Abundance

Gene / protein IDProtein groupSampleTissue/sampleMaterial/groupSampling ageReplicateAbundanceUnitSource
TkAUNG0440905028 weeks old · Latex-exuding control · Biological replicate 1
PAP73
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 14692300000.0LFQ intensityPXD011773
TkAUNG0440905028 weeks old · Latex-exuding control · Biological replicate 2
PAP74
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 23621400000.0LFQ intensityPXD011773
TkAUNG0440905028 weeks old · Latex-exuding control · Biological replicate 3
PAP75
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 34083800000.0LFQ intensityPXD011773
TkAUNG0440905028 weeks old · Latex-exuding control · Biological replicate 4
PAP76
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 44424600000.0LFQ intensityPXD011773
TkAUNG0440905028 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP77
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 13874800000.0LFQ intensityPXD011773
TkAUNG0440905028 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP78
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 23974000000.0LFQ intensityPXD011773
TkAUNG0440905028 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP79
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 33147400000.0LFQ intensityPXD011773
TkAUNG0440905028 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP80
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 43450800000.0LFQ intensityPXD011773
TkAUNG0440905028 weeks old · Non-exuding line · Biological replicate 1
PAP81
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 13506500000.0LFQ intensityPXD011773
TkAUNG0440905028 weeks old · Non-exuding line · Biological replicate 2
PAP82
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 24410000000.0LFQ intensityPXD011773
TkAUNG0440905028 weeks old · Non-exuding line · Biological replicate 3
PAP83
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 33731500000.0LFQ intensityPXD011773
TkAUNG0440905028 weeks old · Non-exuding line · Biological replicate 4
PAP84
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 43740300000.0LFQ intensityPXD011773
TkAUNG04409050212 weeks old · Latex-exuding control · Biological replicate 1
PAP85
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 13966600000.0LFQ intensityPXD011773
TkAUNG04409050212 weeks old · Latex-exuding control · Biological replicate 2
PAP86
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 23285700000.0LFQ intensityPXD011773
TkAUNG04409050212 weeks old · Latex-exuding control · Biological replicate 3
PAP87
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 33081300000.0LFQ intensityPXD011773
TkAUNG04409050212 weeks old · Latex-exuding control · Biological replicate 4
PAP88
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 43678800000.0LFQ intensityPXD011773
TkAUNG04409050212 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP89
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 13681800000.0LFQ intensityPXD011773
TkAUNG04409050212 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP90
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 23606900000.0LFQ intensityPXD011773
TkAUNG04409050212 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP91
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 33309000000.0LFQ intensityPXD011773
TkAUNG04409050212 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP92
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 44247400000.0LFQ intensityPXD011773
TkAUNG04409050212 weeks old · Non-exuding line · Biological replicate 1
PAP93
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 13799100000.0LFQ intensityPXD011773
TkAUNG04409050212 weeks old · Non-exuding line · Biological replicate 2
PAP94
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 23369200000.0LFQ intensityPXD011773
TkAUNG04409050212 weeks old · Non-exuding line · Biological replicate 3
PAP95
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 33852600000.0LFQ intensityPXD011773
TkAUNG04409050212 weeks old · Non-exuding line · Biological replicate 4
PAP96
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 43416000000.0LFQ intensityPXD011773
TkAUNG04409050224 weeks old · Latex-exuding control · Biological replicate 1
PAP97
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 13636100000.0LFQ intensityPXD011773
TkAUNG04409050224 weeks old · Latex-exuding control · Biological replicate 2
PAP98
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 23756700000.0LFQ intensityPXD011773
TkAUNG04409050224 weeks old · Latex-exuding control · Biological replicate 3
PAP99
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 33042900000.0LFQ intensityPXD011773
TkAUNG04409050224 weeks old · Latex-exuding control · Biological replicate 4
PAP100
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 44186000000.0LFQ intensityPXD011773
TkAUNG04409050224 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP101
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 12791200000.0LFQ intensityPXD011773
TkAUNG04409050224 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP102
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 22843300000.0LFQ intensityPXD011773
TkAUNG04409050224 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP103
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 33937500000.0LFQ intensityPXD011773
TkAUNG04409050224 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP104
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 43728700000.0LFQ intensityPXD011773
TkAUNG04409050224 weeks old · Non-exuding line · Biological replicate 1
PAP105
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 12859000000.0LFQ intensityPXD011773
TkAUNG04409050224 weeks old · Non-exuding line · Biological replicate 2
PAP106
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 22486500000.0LFQ intensityPXD011773
TkAUNG04409050224 weeks old · Non-exuding line · Biological replicate 3
PAP107
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 32440000000.0LFQ intensityPXD011773
TkAUNG04409050224 weeks old · Non-exuding line · Biological replicate 4
PAP108
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 42219900000.0LFQ intensityPXD011773
TkAUNG04409088518 weeks old · Latex-exuding control · Biological replicate 1
PAP73
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 11471400000.0LFQ intensityPXD011773
TkAUNG04409088518 weeks old · Latex-exuding control · Biological replicate 2
PAP74
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 21651900000.0LFQ intensityPXD011773
TkAUNG04409088518 weeks old · Latex-exuding control · Biological replicate 3
PAP75
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 31303800000.0LFQ intensityPXD011773
TkAUNG04409088518 weeks old · Latex-exuding control · Biological replicate 4
PAP76
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 41565800000.0LFQ intensityPXD011773
TkAUNG04409088518 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP77
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 11478900000.0LFQ intensityPXD011773
TkAUNG04409088518 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP78
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 21374500000.0LFQ intensityPXD011773
TkAUNG04409088518 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP79
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 31010700000.0LFQ intensityPXD011773
TkAUNG04409088518 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP80
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 41655600000.0LFQ intensityPXD011773
TkAUNG04409088518 weeks old · Non-exuding line · Biological replicate 1
PAP81
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 11399800000.0LFQ intensityPXD011773
TkAUNG04409088518 weeks old · Non-exuding line · Biological replicate 2
PAP82
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 21507700000.0LFQ intensityPXD011773
TkAUNG04409088518 weeks old · Non-exuding line · Biological replicate 3
PAP83
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 31247500000.0LFQ intensityPXD011773
TkAUNG04409088518 weeks old · Non-exuding line · Biological replicate 4
PAP84
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 41395600000.0LFQ intensityPXD011773
TkAUNG044090885112 weeks old · Latex-exuding control · Biological replicate 1
PAP85
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 11120900000.0LFQ intensityPXD011773
TkAUNG044090885112 weeks old · Latex-exuding control · Biological replicate 2
PAP86
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 21248300000.0LFQ intensityPXD011773
TkAUNG044090885112 weeks old · Latex-exuding control · Biological replicate 3
PAP87
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 31074000000.0LFQ intensityPXD011773
TkAUNG044090885112 weeks old · Latex-exuding control · Biological replicate 4
PAP88
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 41394000000.0LFQ intensityPXD011773
TkAUNG044090885112 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP89
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 11321800000.0LFQ intensityPXD011773
TkAUNG044090885112 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP90
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 21078000000.0LFQ intensityPXD011773
TkAUNG044090885112 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP91
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 3919050000.0LFQ intensityPXD011773
TkAUNG044090885112 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP92
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 41423100000.0LFQ intensityPXD011773
TkAUNG044090885112 weeks old · Non-exuding line · Biological replicate 1
PAP93
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 11133500000.0LFQ intensityPXD011773
TkAUNG044090885112 weeks old · Non-exuding line · Biological replicate 2
PAP94
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 21197800000.0LFQ intensityPXD011773
TkAUNG044090885112 weeks old · Non-exuding line · Biological replicate 3
PAP95
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 31061200000.0LFQ intensityPXD011773
TkAUNG044090885112 weeks old · Non-exuding line · Biological replicate 4
PAP96
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 41147200000.0LFQ intensityPXD011773
TkAUNG044090885124 weeks old · Latex-exuding control · Biological replicate 1
PAP97
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 1646790000.0LFQ intensityPXD011773
TkAUNG044090885124 weeks old · Latex-exuding control · Biological replicate 2
PAP98
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 2653230000.0LFQ intensityPXD011773
TkAUNG044090885124 weeks old · Latex-exuding control · Biological replicate 3
PAP99
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 3904020000.0LFQ intensityPXD011773
TkAUNG044090885124 weeks old · Latex-exuding control · Biological replicate 4
PAP100
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 4747040000.0LFQ intensityPXD011773
TkAUNG044090885124 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP101
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 1613630000.0LFQ intensityPXD011773
TkAUNG044090885124 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP102
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 2558510000.0LFQ intensityPXD011773
TkAUNG044090885124 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP103
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 31133900000.0LFQ intensityPXD011773
TkAUNG044090885124 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP104
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 4708630000.0LFQ intensityPXD011773
TkAUNG044090885124 weeks old · Non-exuding line · Biological replicate 1
PAP105
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 1695390000.0LFQ intensityPXD011773
TkAUNG044090885124 weeks old · Non-exuding line · Biological replicate 2
PAP106
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 21248500000.0LFQ intensityPXD011773
TkAUNG044090885124 weeks old · Non-exuding line · Biological replicate 3
PAP107
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 3511540000.0LFQ intensityPXD011773
TkAUNG044090885124 weeks old · Non-exuding line · Biological replicate 4
PAP108
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 4914160000.0LFQ intensityPXD011773
TkAUNG04409040678 weeks old · Latex-exuding control · Biological replicate 1
PAP73
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 11528400000.0LFQ intensityPXD011773
TkAUNG04409040678 weeks old · Latex-exuding control · Biological replicate 2
PAP74
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 21548900000.0LFQ intensityPXD011773
TkAUNG04409040678 weeks old · Latex-exuding control · Biological replicate 3
PAP75
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 31253000000.0LFQ intensityPXD011773
TkAUNG04409040678 weeks old · Latex-exuding control · Biological replicate 4
PAP76
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 41899000000.0LFQ intensityPXD011773
TkAUNG04409040678 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP77
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 11439700000.0LFQ intensityPXD011773
TkAUNG04409040678 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP78
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 21629000000.0LFQ intensityPXD011773
TkAUNG04409040678 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP79
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 31444200000.0LFQ intensityPXD011773
TkAUNG04409040678 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP80
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 41392900000.0LFQ intensityPXD011773
TkAUNG04409040678 weeks old · Non-exuding line · Biological replicate 1
PAP81
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 11275000000.0LFQ intensityPXD011773
TkAUNG04409040678 weeks old · Non-exuding line · Biological replicate 2
PAP82
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 22033400000.0LFQ intensityPXD011773
TkAUNG04409040678 weeks old · Non-exuding line · Biological replicate 3
PAP83
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 31810800000.0LFQ intensityPXD011773
TkAUNG04409040678 weeks old · Non-exuding line · Biological replicate 4
PAP84
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 41491700000.0LFQ intensityPXD011773
TkAUNG044090406712 weeks old · Latex-exuding control · Biological replicate 1
PAP85
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 11247100000.0LFQ intensityPXD011773
TkAUNG044090406712 weeks old · Latex-exuding control · Biological replicate 2
PAP86
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 21214600000.0LFQ intensityPXD011773
TkAUNG044090406712 weeks old · Latex-exuding control · Biological replicate 3
PAP87
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 31257500000.0LFQ intensityPXD011773
TkAUNG044090406712 weeks old · Latex-exuding control · Biological replicate 4
PAP88
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 41278900000.0LFQ intensityPXD011773
TkAUNG044090406712 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP89
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 11533900000.0LFQ intensityPXD011773
TkAUNG044090406712 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP90
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 21222900000.0LFQ intensityPXD011773
TkAUNG044090406712 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP91
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 31024100000.0LFQ intensityPXD011773
TkAUNG044090406712 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP92
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 41296600000.0LFQ intensityPXD011773
TkAUNG044090406712 weeks old · Non-exuding line · Biological replicate 1
PAP93
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 11265300000.0LFQ intensityPXD011773
TkAUNG044090406712 weeks old · Non-exuding line · Biological replicate 2
PAP94
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 21358500000.0LFQ intensityPXD011773
TkAUNG044090406712 weeks old · Non-exuding line · Biological replicate 3
PAP95
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 31192800000.0LFQ intensityPXD011773
TkAUNG044090406712 weeks old · Non-exuding line · Biological replicate 4
PAP96
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 41324800000.0LFQ intensityPXD011773
TkAUNG044090406724 weeks old · Latex-exuding control · Biological replicate 1
PAP97
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 1847810000.0LFQ intensityPXD011773
TkAUNG044090406724 weeks old · Latex-exuding control · Biological replicate 2
PAP98
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 2903360000.0LFQ intensityPXD011773
TkAUNG044090406724 weeks old · Latex-exuding control · Biological replicate 3
PAP99
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 31058900000.0LFQ intensityPXD011773
TkAUNG044090406724 weeks old · Latex-exuding control · Biological replicate 4
PAP100
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 4826630000.0LFQ intensityPXD011773
TkAUNG044090406724 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP101
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 11199300000.0LFQ intensityPXD011773
TkAUNG044090406724 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP102
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 2958930000.0LFQ intensityPXD011773
TkAUNG044090406724 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP103
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 31214200000.0LFQ intensityPXD011773
TkAUNG044090406724 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP104
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 41069300000.0LFQ intensityPXD011773
TkAUNG044090406724 weeks old · Non-exuding line · Biological replicate 1
PAP105
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 11145900000.0LFQ intensityPXD011773
TkAUNG044090406724 weeks old · Non-exuding line · Biological replicate 2
PAP106
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 21331500000.0LFQ intensityPXD011773
TkAUNG044090406724 weeks old · Non-exuding line · Biological replicate 3
PAP107
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 31012900000.0LFQ intensityPXD011773
TkAUNG044090406724 weeks old · Non-exuding line · Biological replicate 4
PAP108
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 41339400000.0LFQ intensityPXD011773
TkAUNG044090588 weeks old · Latex-exuding control · Biological replicate 1
PAP73
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 1137410000.0LFQ intensityPXD011773
TkAUNG044090588 weeks old · Latex-exuding control · Biological replicate 2
PAP74
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 2147240000.0LFQ intensityPXD011773
TkAUNG044090588 weeks old · Latex-exuding control · Biological replicate 3
PAP75
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 3166090000.0LFQ intensityPXD011773
TkAUNG044090588 weeks old · Latex-exuding control · Biological replicate 4
PAP76
Root tissue (whole-root protein extract)Latex-exuding control8 weeks oldBiological replicate 4188880000.0LFQ intensityPXD011773
TkAUNG044090588 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP77
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 1147920000.0LFQ intensityPXD011773
TkAUNG044090588 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP78
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 2136140000.0LFQ intensityPXD011773
TkAUNG044090588 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP79
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 3124770000.0LFQ intensityPXD011773
TkAUNG044090588 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP80
Root tissue (whole-root protein extract)Latex-exuding transgenic control8 weeks oldBiological replicate 4186460000.0LFQ intensityPXD011773
TkAUNG044090588 weeks old · Non-exuding line · Biological replicate 1
PAP81
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 1146700000.0LFQ intensityPXD011773
TkAUNG044090588 weeks old · Non-exuding line · Biological replicate 2
PAP82
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 2248940000.0LFQ intensityPXD011773
TkAUNG044090588 weeks old · Non-exuding line · Biological replicate 3
PAP83
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 3273110000.0LFQ intensityPXD011773
TkAUNG044090588 weeks old · Non-exuding line · Biological replicate 4
PAP84
Root tissue (whole-root protein extract)Non-exuding line8 weeks oldBiological replicate 4325820000.0LFQ intensityPXD011773
TkAUNG0440905812 weeks old · Latex-exuding control · Biological replicate 1
PAP85
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 1125770000.0LFQ intensityPXD011773
TkAUNG0440905812 weeks old · Latex-exuding control · Biological replicate 2
PAP86
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 2144670000.0LFQ intensityPXD011773
TkAUNG0440905812 weeks old · Latex-exuding control · Biological replicate 3
PAP87
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 387623000.0LFQ intensityPXD011773
TkAUNG0440905812 weeks old · Latex-exuding control · Biological replicate 4
PAP88
Root tissue (whole-root protein extract)Latex-exuding control12 weeks oldBiological replicate 4171130000.0LFQ intensityPXD011773
TkAUNG0440905812 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP89
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 1132240000.0LFQ intensityPXD011773
TkAUNG0440905812 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP90
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 2126520000.0LFQ intensityPXD011773
TkAUNG0440905812 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP91
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 388884000.0LFQ intensityPXD011773
TkAUNG0440905812 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP92
Root tissue (whole-root protein extract)Latex-exuding transgenic control12 weeks oldBiological replicate 471760000.0LFQ intensityPXD011773
TkAUNG0440905812 weeks old · Non-exuding line · Biological replicate 1
PAP93
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 1100860000.0LFQ intensityPXD011773
TkAUNG0440905812 weeks old · Non-exuding line · Biological replicate 2
PAP94
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 2102250000.0LFQ intensityPXD011773
TkAUNG0440905812 weeks old · Non-exuding line · Biological replicate 3
PAP95
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 376312000.0LFQ intensityPXD011773
TkAUNG0440905812 weeks old · Non-exuding line · Biological replicate 4
PAP96
Root tissue (whole-root protein extract)Non-exuding line12 weeks oldBiological replicate 465339000.0LFQ intensityPXD011773
TkAUNG0440905824 weeks old · Latex-exuding control · Biological replicate 1
PAP97
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 159243000.0LFQ intensityPXD011773
TkAUNG0440905824 weeks old · Latex-exuding control · Biological replicate 2
PAP98
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 247278000.0LFQ intensityPXD011773
TkAUNG0440905824 weeks old · Latex-exuding control · Biological replicate 3
PAP99
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 381044000.0LFQ intensityPXD011773
TkAUNG0440905824 weeks old · Latex-exuding control · Biological replicate 4
PAP100
Root tissue (whole-root protein extract)Latex-exuding control24 weeks oldBiological replicate 4100150000.0LFQ intensityPXD011773
TkAUNG0440905824 weeks old · Latex-exuding transgenic control · Biological replicate 1
PAP101
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 177544000.0LFQ intensityPXD011773
TkAUNG0440905824 weeks old · Latex-exuding transgenic control · Biological replicate 2
PAP102
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 247129000.0LFQ intensityPXD011773
TkAUNG0440905824 weeks old · Latex-exuding transgenic control · Biological replicate 3
PAP103
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 3107080000.0LFQ intensityPXD011773
TkAUNG0440905824 weeks old · Latex-exuding transgenic control · Biological replicate 4
PAP104
Root tissue (whole-root protein extract)Latex-exuding transgenic control24 weeks oldBiological replicate 443000000.0LFQ intensityPXD011773
TkAUNG0440905824 weeks old · Non-exuding line · Biological replicate 1
PAP105
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 164914000.0LFQ intensityPXD011773
TkAUNG0440905824 weeks old · Non-exuding line · Biological replicate 2
PAP106
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 256043000.0LFQ intensityPXD011773
TkAUNG0440905824 weeks old · Non-exuding line · Biological replicate 3
PAP107
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 320609000.0LFQ intensityPXD011773
TkAUNG0440905824 weeks old · Non-exuding line · Biological replicate 4
PAP108
Root tissue (whole-root protein extract)Non-exuding line24 weeks oldBiological replicate 498760000.0LFQ intensityPXD011773
Data source and protein identification

PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files

Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.

Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.

TkAUNG044090

Protein group 502 · Peptides: 27 · Unique peptides: 11 · Sequence coverage: 66.2%

Mapping evidence: Source mapping category; see original label in download

Source protein IDs: evm.model.utg11127.3|evm.TU.utg11127.3|utg11127|GWHAAAA00005544.:14073-14451,

Protein group 8851 · Peptides: 25 · Unique peptides: 11 · Sequence coverage: 64.6%

Mapping evidence: Source mapping category; see original label in download

Source protein IDs: evm.model.utg9411.1|evm.TU.utg9411.1|utg9411|GWHAAAA00028814.:6596-6971,

Protein group 4067 · Peptides: 26 · Unique peptides: 7 · Sequence coverage: 65.5%

Mapping evidence: Source mapping category; see original label in download

Source protein IDs: evm.model.utg2278.3|evm.TU.utg2278.3|utg2278|GWHAAAA00017400.:54861-55254,

Protein group 58 · Peptides: 22 · Unique peptides: 3 · Sequence coverage: 50.3%

Mapping evidence: Source mapping category; see original label in download

Source protein IDs: evm.model.utg10129.4|evm.TU.utg10129.4|utg10129|GWHAAAA00001938.:23554-23938,;evm.model.utg6772.6|evm.TU.utg6772.6|utg6772|GWHAAAA00006208.:27705-28089,

Sample design and raw-file catalogue
ExperimentSampling ageMaterial/groupReplicateRaw files
PAP738 weeks oldLatex-exuding controlBiological replicate 13
PAP748 weeks oldLatex-exuding controlBiological replicate 23
PAP758 weeks oldLatex-exuding controlBiological replicate 33
PAP768 weeks oldLatex-exuding controlBiological replicate 43
PAP778 weeks oldLatex-exuding transgenic controlBiological replicate 13
PAP788 weeks oldLatex-exuding transgenic controlBiological replicate 23
PAP798 weeks oldLatex-exuding transgenic controlBiological replicate 33
PAP808 weeks oldLatex-exuding transgenic controlBiological replicate 43
PAP818 weeks oldNon-exuding lineBiological replicate 13
PAP828 weeks oldNon-exuding lineBiological replicate 23
PAP838 weeks oldNon-exuding lineBiological replicate 33
PAP848 weeks oldNon-exuding lineBiological replicate 43
PAP8512 weeks oldLatex-exuding controlBiological replicate 13
PAP8612 weeks oldLatex-exuding controlBiological replicate 23
PAP8712 weeks oldLatex-exuding controlBiological replicate 33
PAP8812 weeks oldLatex-exuding controlBiological replicate 43
PAP8912 weeks oldLatex-exuding transgenic controlBiological replicate 13
PAP9012 weeks oldLatex-exuding transgenic controlBiological replicate 23
PAP9112 weeks oldLatex-exuding transgenic controlBiological replicate 33
PAP9212 weeks oldLatex-exuding transgenic controlBiological replicate 43
PAP9312 weeks oldNon-exuding lineBiological replicate 13
PAP9412 weeks oldNon-exuding lineBiological replicate 23
PAP9512 weeks oldNon-exuding lineBiological replicate 33
PAP9612 weeks oldNon-exuding lineBiological replicate 43
PAP9724 weeks oldLatex-exuding controlBiological replicate 13
PAP9824 weeks oldLatex-exuding controlBiological replicate 23
PAP9924 weeks oldLatex-exuding controlBiological replicate 33
PAP10024 weeks oldLatex-exuding controlBiological replicate 43
PAP10124 weeks oldLatex-exuding transgenic controlBiological replicate 13
PAP10224 weeks oldLatex-exuding transgenic controlBiological replicate 23
PAP10324 weeks oldLatex-exuding transgenic controlBiological replicate 33
PAP10424 weeks oldLatex-exuding transgenic controlBiological replicate 43
PAP10524 weeks oldNon-exuding lineBiological replicate 13
PAP10624 weeks oldNon-exuding lineBiological replicate 23
PAP10724 weeks oldNon-exuding lineBiological replicate 33
PAP10824 weeks oldNon-exuding lineBiological replicate 43