Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA07G088970 | TkA07G088970 | LXL04_027729 | 76, 5240, 5861 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA07G088970 | 76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 7.40542e+09 | 1.07047e+09 | 5.35235e+08 | 4 | LFQ intensity |
TkA07G088970 | 76 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 7.86652e+09 | 1.06355e+09 | 5.31776e+08 | 4 | LFQ intensity |
TkA07G088970 | 76 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 7.85945e+09 | 1.44165e+09 | 7.20824e+08 | 4 | LFQ intensity |
TkA07G088970 | 76 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 5.98568e+09 | 9.48712e+08 | 4.74356e+08 | 4 | LFQ intensity |
TkA07G088970 | 76 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 6.20332e+09 | 4.49635e+08 | 2.24817e+08 | 4 | LFQ intensity |
TkA07G088970 | 76 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 6.10808e+09 | 6.55775e+08 | 3.27887e+08 | 4 | LFQ intensity |
TkA07G088970 | 76 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 5.33935e+09 | 1.4495e+09 | 7.24751e+08 | 4 | LFQ intensity |
TkA07G088970 | 76 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 4.03782e+09 | 2.49475e+08 | 1.24737e+08 | 4 | LFQ intensity |
TkA07G088970 | 76 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 3.9041e+09 | 5.03882e+08 | 2.51941e+08 | 4 | LFQ intensity |
TkA07G088970 | 5240 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 1.00123e+09 | 2.83874e+08 | 1.41937e+08 | 4 | LFQ intensity |
TkA07G088970 | 5240 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.16882e+09 | 1.56015e+08 | 7.80076e+07 | 4 | LFQ intensity |
TkA07G088970 | 5240 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 5.23815e+08 | 1.63883e+08 | 8.19417e+07 | 4 | LFQ intensity |
TkA07G088970 | 5240 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 4.62735e+08 | 1.29342e+08 | 6.46708e+07 | 4 | LFQ intensity |
TkA07G088970 | 5240 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 5.92625e+08 | 1.59821e+08 | 7.99106e+07 | 4 | LFQ intensity |
TkA07G088970 | 5240 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 6.70118e+08 | 2.52679e+08 | 1.26339e+08 | 4 | LFQ intensity |
TkA07G088970 | 5240 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 7.72268e+08 | 3.76275e+08 | 1.88137e+08 | 4 | LFQ intensity |
TkA07G088970 | 5240 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 6.61125e+08 | 2.20112e+08 | 1.10056e+08 | 4 | LFQ intensity |
TkA07G088970 | 5240 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 4.33728e+08 | 8.0639e+07 | 4.03195e+07 | 4 | LFQ intensity |
TkA07G088970 | 5861 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 5.5879e+07 | 6.53452e+07 | 3.26726e+07 | 4 | LFQ intensity |
TkA07G088970 | 5861 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 9.37265e+07 | 1.18113e+08 | 5.90566e+07 | 4 | LFQ intensity |
TkA07G088970 | 5861 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 2.16348e+07 | 1.78212e+07 | 8.91061e+06 | 4 | LFQ intensity |
TkA07G088970 | 5861 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA07G088970 | 5861 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA07G088970 | 5861 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 6.1476e+06 | 7.35934e+06 | 3.67967e+06 | 4 | LFQ intensity |
TkA07G088970 | 5861 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.81212e+06 | 3.62425e+06 | 1.81212e+06 | 4 | LFQ intensity |
TkA07G088970 | 5861 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 7.59225e+06 | 9.33403e+06 | 4.66702e+06 | 4 | LFQ intensity |
TkA07G088970 | 5861 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA07G088970 | 76 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 6886100000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 8958600000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 7221100000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 6555900000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 7516100000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 6702700000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 8003300000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 9244000000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 7598400000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 6293200000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 9784100000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 7762100000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 4633800000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 6517700000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 6039600000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 6751600000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 6318600000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 5564900000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 6308700000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 6621100000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 5419400000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 5697500000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 6510900000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 6804500000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 7269000000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 4468500000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 5603900000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 4016000000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 4316300000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 3791400000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 4176600000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 3867000000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 4116800000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 4324600000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 3175700000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 76 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 3999300000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 747920000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 1136700000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 784210000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 1336100000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 1098500000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 1024700000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 1165800000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 1386300000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 449480000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 766960000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 410430000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 468390000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 303840000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 618140000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 484270000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 444690000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 488640000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 429430000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 767990000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 684440000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 442130000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 857930000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 917670000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 462740000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 1314400000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 484850000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 733770000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 556050000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 583080000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 763550000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 395490000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 902380000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 510540000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 493090000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 345490000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5240 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 385790000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 124410000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 99106000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 50140000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 19658000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 269910000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 35198000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 367400.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 19037000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 43789000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 23346000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 14673000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 9917400.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 7248500.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 19109000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 11260000.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA07G088970 | 5861 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA07G088970
Protein group 76 · Peptides: 21 · Unique peptides: 3 · Sequence coverage: 55.0%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg1018.48|evm.TU.utg1018.48|utg1018|GWHAAAA00022925.:241082-241948,
Protein group 5240 · Peptides: 11 · Unique peptides: 4 · Sequence coverage: 28.7%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg2949.3|evm.TU.utg2949.3|utg2949|GWHAAAA00021889.:14167-14781,;evm.model.utg34198.5|evm.TU.utg34198.5|utg34198|GWHAAAA00024087.:15083-15257,
Protein group 5861 · Peptides: 9 · Unique peptides: 1 · Sequence coverage: 24.4%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg34198.3|evm.TU.utg34198.3|utg34198|GWHAAAA00024087.:3559-3564,
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |