Proteomics query
Enter gene or protein IDs and select one or more datasets to view abundance, replicate identification and 2-DE evidence.
3 selectable datasets · 3 independent public projects · 56 LFQ experiments plus 3 mature-root identification replicates
Projects are shown separately with independent plot scales; LFQ intensities are not directly comparable across projects. Aliases resolved to the same gene are deduplicated; multiple protein groups linked to a gene are summarized separately.
Examples
ID Resolution
| Input ID | Display ID | Linked lookup ID | Protein groups | Values | Status |
|---|---|---|---|---|---|
TkA06G419870 | TkA06G419870 | LXL04_028831 | 4464, 4598, 2523 | 108 | Resolved |
Group Summary
Download current dataset and queried genes (TSV)
Mean LFQ intensity, sample SD, SE and experiment count n are computed for each protein group using source time/group labels, retaining source zeros. Bars show mean LFQ intensity with an independent scale per dataset.
| Gene / protein ID | Protein group | Tissue/sample | Material/group | Sampling age | Mean intensity | SD | SE | n | Unit |
|---|---|---|---|---|---|---|---|---|---|
TkA06G419870 | 4464 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 9.4737e+06 | 1.52105e+07 | 7.60525e+06 | 4 | LFQ intensity |
TkA06G419870 | 4464 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 1.01534e+07 | 4.32163e+06 | 2.16082e+06 | 4 | LFQ intensity |
TkA06G419870 | 4464 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 8.68532e+06 | 1.30149e+07 | 6.50746e+06 | 4 | LFQ intensity |
TkA06G419870 | 4464 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 3.95075e+06 | 7.9015e+06 | 3.95075e+06 | 4 | LFQ intensity |
TkA06G419870 | 4464 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 9.25275e+06 | 1.85055e+07 | 9.25275e+06 | 4 | LFQ intensity |
TkA06G419870 | 4464 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 2.10732e+07 | 4.21465e+07 | 2.10732e+07 | 4 | LFQ intensity |
TkA06G419870 | 4464 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA06G419870 | 4464 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 4.88217e+07 | 5.38418e+07 | 2.69209e+07 | 4 | LFQ intensity |
TkA06G419870 | 4464 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.3418e+07 | 2.2488e+07 | 1.1244e+07 | 4 | LFQ intensity |
TkA06G419870 | 4598 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 7.33125e+07 | 9.79186e+06 | 4.89593e+06 | 4 | LFQ intensity |
TkA06G419870 | 4598 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 6.92205e+07 | 1.89843e+07 | 9.49213e+06 | 4 | LFQ intensity |
TkA06G419870 | 4598 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 6.09052e+07 | 9.31414e+06 | 4.65707e+06 | 4 | LFQ intensity |
TkA06G419870 | 4598 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 1.03499e+08 | 4.46626e+07 | 2.23313e+07 | 4 | LFQ intensity |
TkA06G419870 | 4598 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 9.42045e+07 | 1.01124e+07 | 5.05619e+06 | 4 | LFQ intensity |
TkA06G419870 | 4598 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 5.3736e+07 | 2.10276e+07 | 1.05138e+07 | 4 | LFQ intensity |
TkA06G419870 | 4598 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 1.33948e+08 | 1.18241e+07 | 5.91206e+06 | 4 | LFQ intensity |
TkA06G419870 | 4598 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 8.4911e+07 | 5.11278e+07 | 2.55639e+07 | 4 | LFQ intensity |
TkA06G419870 | 4598 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 1.3263e+08 | 1.32569e+08 | 6.62846e+07 | 4 | LFQ intensity |
TkA06G419870 | 2523 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | 0 | 0 | 0 | 4 | LFQ intensity |
TkA06G419870 | 2523 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | 9.9575e+06 | 1.9915e+07 | 9.9575e+06 | 4 | LFQ intensity |
TkA06G419870 | 2523 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | 2.78322e+07 | 2.33037e+07 | 1.16519e+07 | 4 | LFQ intensity |
TkA06G419870 | 2523 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | 2.90258e+07 | 2.12663e+07 | 1.06331e+07 | 4 | LFQ intensity |
TkA06G419870 | 2523 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | 2.04302e+07 | 1.59545e+07 | 7.97725e+06 | 4 | LFQ intensity |
TkA06G419870 | 2523 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | 1.2108e+07 | 1.40108e+07 | 7.00541e+06 | 4 | LFQ intensity |
TkA06G419870 | 2523 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | 6.94668e+07 | 3.72496e+07 | 1.86248e+07 | 4 | LFQ intensity |
TkA06G419870 | 2523 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | 3.5654e+07 | 3.31167e+07 | 1.65584e+07 | 4 | LFQ intensity |
TkA06G419870 | 2523 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | 3.57108e+07 | 4.63792e+07 | 2.31896e+07 | 4 | LFQ intensity |
Sample-Level Protein Abundance
| Gene / protein ID | Protein group | Sample | Tissue/sample | Material/group | Sampling age | Replicate | Abundance | Unit | Source |
|---|---|---|---|---|---|---|---|---|---|
TkA06G419870 | 4464 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 31891000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 6003800.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 13274000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 8344100.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 4906600.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 14089000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 7211300.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 27530000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 15803000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 37011000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 84293000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 105970000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 5846900.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 83470000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 6873900.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 46798000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4464 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 79919000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 72766000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 59668000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 80897000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 67854000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 48966000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 94785000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 65277000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 72853000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 51582000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 63277000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 55909000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 88980000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 159040000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 113380000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 52597000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 99847000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 97351000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 100450000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 79170000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 34558000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 45163000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 51798000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 83425000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 128060000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 123860000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 150750000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 133120000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 56878000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 121770000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 27306000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 133690000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 13612000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 69950000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 318670000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 4598 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 128290000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 8 weeks old · Latex-exuding control · Biological replicate 1PAP73 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 8 weeks old · Latex-exuding control · Biological replicate 2PAP74 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 8 weeks old · Latex-exuding control · Biological replicate 3PAP75 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 8 weeks old · Latex-exuding control · Biological replicate 4PAP76 | Root tissue (whole-root protein extract) | Latex-exuding control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP77 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 1 | 39830000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP78 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP79 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 8 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP80 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 8 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 8 weeks old · Non-exuding line · Biological replicate 1PAP81 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 1 | 18523000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 8 weeks old · Non-exuding line · Biological replicate 2PAP82 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 2 | 40152000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 8 weeks old · Non-exuding line · Biological replicate 3PAP83 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 3 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 8 weeks old · Non-exuding line · Biological replicate 4PAP84 | Root tissue (whole-root protein extract) | Non-exuding line | 8 weeks old | Biological replicate 4 | 52654000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 12 weeks old · Latex-exuding control · Biological replicate 1PAP85 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 12 weeks old · Latex-exuding control · Biological replicate 2PAP86 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 2 | 45773000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 12 weeks old · Latex-exuding control · Biological replicate 3PAP87 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 3 | 44065000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 12 weeks old · Latex-exuding control · Biological replicate 4PAP88 | Root tissue (whole-root protein extract) | Latex-exuding control | 12 weeks old | Biological replicate 4 | 26265000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP89 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 1 | 28662000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP90 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP91 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 3 | 36631000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 12 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP92 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 12 weeks old | Biological replicate 4 | 16428000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 12 weeks old · Non-exuding line · Biological replicate 1PAP93 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 1 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 12 weeks old · Non-exuding line · Biological replicate 2PAP94 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 12 weeks old · Non-exuding line · Biological replicate 3PAP95 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 3 | 23099000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 12 weeks old · Non-exuding line · Biological replicate 4PAP96 | Root tissue (whole-root protein extract) | Non-exuding line | 12 weeks old | Biological replicate 4 | 25333000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 24 weeks old · Latex-exuding control · Biological replicate 1PAP97 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 1 | 84227000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 24 weeks old · Latex-exuding control · Biological replicate 2PAP98 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 2 | 22708000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 24 weeks old · Latex-exuding control · Biological replicate 3PAP99 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 3 | 60502000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 24 weeks old · Latex-exuding control · Biological replicate 4PAP100 | Root tissue (whole-root protein extract) | Latex-exuding control | 24 weeks old | Biological replicate 4 | 110430000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 1PAP101 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 1 | 41439000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 2PAP102 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 2 | 78332000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 3PAP103 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 3 | 22845000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 24 weeks old · Latex-exuding transgenic control · Biological replicate 4PAP104 | Root tissue (whole-root protein extract) | Latex-exuding transgenic control | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 24 weeks old · Non-exuding line · Biological replicate 1PAP105 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 1 | 45421000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 24 weeks old · Non-exuding line · Biological replicate 2PAP106 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 2 | 0.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 24 weeks old · Non-exuding line · Biological replicate 3PAP107 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 3 | 97422000.0 | LFQ intensity | PXD011773 |
TkA06G419870 | 2523 | 24 weeks old · Non-exuding line · Biological replicate 4PAP108 | Root tissue (whole-root protein extract) | Non-exuding line | 24 weeks old | Biological replicate 4 | 0.0 | LFQ intensity | PXD011773 |
Data source and protein identification
PRIDE PXD011773 · MaxQuant · 108 raw mass-spectrometry files
Archived labels 8d, 12d and 24d correspond to 8-, 12- and 24-week-old plants in the paper. The page shows verified ages; downloads retain source labels and add verified age fields.
Original download fields retain archived labels; added fields provide verified age, tissue, replication and localized group labels.
TkA06G419870
Protein group 4464 · Peptides: 6 · Unique peptides: 6 · Sequence coverage: 14.3%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg24697.2|evm.TU.utg24697.2|utg24697|GWHAAAA00027057.:4951-5286,;evm.model.utg9780.17|evm.TU.utg9780.17|utg9780|GWHAAAA00014314.:58176-58332,
Protein group 4598 · Peptides: 8 · Unique peptides: 3 · Sequence coverage: 22.6%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg25460.8|evm.TU.utg25460.8|utg25460|GWHAAAA00011131.:13620-13877,
Protein group 2523 · Peptides: 7 · Unique peptides: 2 · Sequence coverage: 24.1%
Mapping evidence: Source mapping category; see original label in download
Source protein IDs: evm.model.utg16837.1|evm.TU.utg16837.1|utg16837|GWHAAAA00016083.:16095-16185,
Sample design and raw-file catalogue
| Experiment | Sampling age | Material/group | Replicate | Raw files |
|---|---|---|---|---|
| PAP73 | 8 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP74 | 8 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP75 | 8 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP76 | 8 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP77 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP78 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP79 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP80 | 8 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP81 | 8 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP82 | 8 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP83 | 8 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP84 | 8 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP85 | 12 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP86 | 12 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP87 | 12 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP88 | 12 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP89 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP90 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP91 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP92 | 12 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP93 | 12 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP94 | 12 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP95 | 12 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP96 | 12 weeks old | Non-exuding line | Biological replicate 4 | 3 |
| PAP97 | 24 weeks old | Latex-exuding control | Biological replicate 1 | 3 |
| PAP98 | 24 weeks old | Latex-exuding control | Biological replicate 2 | 3 |
| PAP99 | 24 weeks old | Latex-exuding control | Biological replicate 3 | 3 |
| PAP100 | 24 weeks old | Latex-exuding control | Biological replicate 4 | 3 |
| PAP101 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 1 | 3 |
| PAP102 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 2 | 3 |
| PAP103 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 3 | 3 |
| PAP104 | 24 weeks old | Latex-exuding transgenic control | Biological replicate 4 | 3 |
| PAP105 | 24 weeks old | Non-exuding line | Biological replicate 1 | 3 |
| PAP106 | 24 weeks old | Non-exuding line | Biological replicate 2 | 3 |
| PAP107 | 24 weeks old | Non-exuding line | Biological replicate 3 | 3 |
| PAP108 | 24 weeks old | Non-exuding line | Biological replicate 4 | 3 |