ID Crosswalk
Original TK1151 gene IDs are linked to OH-1004 gene-level counterparts. TK1151 and OH-1004 are different Taraxacum kok-saghyz materials, not two releases of the same cultivar. Complete crosswalk coverage does not mean every relationship is one-to-one; complex mappings require review of their category and evidence.
Version Sources
| Version | Assembly / Annotation Accession | Source Database | Publication | DOI / PMID | Download Date |
|---|---|---|---|---|---|
| TK1151 Taraxacum kok-saghyz |
GWHBCHF00000000 GWHBCHF00000000 GFF/RNA/CDS/Protein |
NGDC Genome Warehouse (GWH) |
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum Tao Lin, Xia Xu, Huilong Du, Xiuli Fan, Qingwen Chen, et al.; Science China Life Sciences; 2022 |
10.1007/s11427-021-2033-2 PMID: 34939160 |
2026-08-14 |
| OH-1004 / OSU_TarKok_2.0 Taraxacum kok-saghyz |
GCA_047496595.1 GCA_047496595.1_OSU_TarKok_2.0 GenBank GFF |
NCBI Assembly / NGDC integrated NCBI Assembly |
no linked publication found in NCBI/NGDC assembly records as of 2026-08-17 not available |
not available | 2026-08-14 |
Complete Gene ID Crosswalk
TK1151 reference: 45224 genes; 7 rows in the current filter. Showing page 1 / 1.
All
Strict 1:1: 6347
Probable 1:1: 1703
One-to-many: 826
Many-to-one: 24458
Unmapped: 2782
Annotation conflict: 9108
Strict 1:1 requires RBH, high identity, query/target coverage, CDS support, and JCVI synteny. Probable 1:1 still requires RBH and coverage thresholds. Low-coverage, multi-hit, split/merged annotation, and unplaced-sequence cases are excluded from 1:1 conversion. Protein and CDS coverage each use the actual sequence span of the best-scoring single HSP divided by the corresponding representative sequence length; query is TK1151 and target is OH-1004. Protein, CDS, and transcript isoforms are not shown here.
| TK1151 Gene ID | OH-1004 Gene ID | Category | Relationship / confidence | Identity / coverage | Synteny block | Description |
|---|---|---|---|---|---|---|
|
TkA01G208000
Chr01:52930302-52931639 (+)
GWHBCHF00000002
|
LXL04_029893
Chr06:102965333-102969354 (+)
CM104804.1
|
Many-to-one | non reciprocal best hit Complex |
73.500 Q 97.004 / T 25.025 |
TkA01G208000 | |
|
TkA01G241280
Chr01:61016672-61017835 (-)
GWHBCHF00000002
|
LXL04_029893
Chr06:102965333-102969354 (+)
CM104804.1
|
Many-to-one | non reciprocal best hit Complex |
69.300 Q 96.154 / T 19.095 |
TkA01G241280 | |
|
TkA04G188250
Chr04:48508931-48510465 (-)
GWHBCHF00000005
|
LXL04_029893
Chr06:102965333-102969354 (+)
CM104804.1
|
Many-to-one | non reciprocal best hit Complex |
78.500 Q 100.000 / T 31.357 |
JCVI_TKOH_00186 | TkA04G188250 |
|
TkA05G412510
Chr05:102626563-102627444 (+)
GWHBCHF00000006
|
LXL04_029893
Chr06:102965333-102969354 (+)
CM104804.1
|
Many-to-one | non reciprocal best hit Complex |
68.600 Q 100.000 / T 9.849 |
TkA05G412510 | |
|
TkA06G043700
Chr06:11836755-11837558 (+)
GWHBCHF00000007
|
LXL04_029893
Chr06:102965333-102969354 (+)
CM104804.1
|
Many-to-one | non reciprocal best hit Complex |
77.800 Q 71.171 / T 8.141 |
TkA06G043700 | |
|
TkA06G377250
Chr06:93459577-93462349 (-)
GWHBCHF00000007
|
LXL04_029893
Chr06:102965333-102969354 (+)
CM104804.1
|
Annotation conflict | RBH but below probable coverage or synteny threshold Review |
58.300 Q 73.425 / T 49.849 |
TkA06G377250 | |
|
TkA07G221900
Chr07:55623433-55624596 (-)
GWHBCHF00000008
|
LXL04_029893
Chr06:102965333-102969354 (+)
CM104804.1
|
Many-to-one | non reciprocal best hit Complex |
69.300 Q 96.154 / T 19.095 |
TkA07G221900 |
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