ID Crosswalk
Original TK1151 gene IDs are linked to OH-1004 gene-level counterparts. TK1151 and OH-1004 are different Taraxacum kok-saghyz materials, not two releases of the same cultivar. Complete crosswalk coverage does not mean every relationship is one-to-one; complex mappings require review of their category and evidence.
Version Sources
| Version | Assembly / Annotation Accession | Source Database | Publication | DOI / PMID | Download Date |
|---|---|---|---|---|---|
| TK1151 Taraxacum kok-saghyz |
GWHBCHF00000000 GWHBCHF00000000 GFF/RNA/CDS/Protein |
NGDC Genome Warehouse (GWH) |
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum Tao Lin, Xia Xu, Huilong Du, Xiuli Fan, Qingwen Chen, et al.; Science China Life Sciences; 2022 |
10.1007/s11427-021-2033-2 PMID: 34939160 |
2026-08-14 |
| OH-1004 / OSU_TarKok_2.0 Taraxacum kok-saghyz |
GCA_047496595.1 GCA_047496595.1_OSU_TarKok_2.0 GenBank GFF |
NCBI Assembly / NGDC integrated NCBI Assembly |
no linked publication found in NCBI/NGDC assembly records as of 2026-08-17 not available |
not available | 2026-08-14 |
Complete Gene ID Crosswalk
TK1151 reference: 45224 genes; 6 rows in the current filter. Showing page 1 / 1.
All
Strict 1:1: 6347
Probable 1:1: 1703
One-to-many: 826
Many-to-one: 24458
Unmapped: 2782
Annotation conflict: 9108
Strict 1:1 requires RBH, high identity, query/target coverage, CDS support, and JCVI synteny. Probable 1:1 still requires RBH and coverage thresholds. Low-coverage, multi-hit, split/merged annotation, and unplaced-sequence cases are excluded from 1:1 conversion. Protein and CDS coverage each use the actual sequence span of the best-scoring single HSP divided by the corresponding representative sequence length; query is TK1151 and target is OH-1004. Protein, CDS, and transcript isoforms are not shown here.
| TK1151 Gene ID | OH-1004 Gene ID | Category | Relationship / confidence | Identity / coverage | Synteny block | Description |
|---|---|---|---|---|---|---|
|
TkA01G495180
Chr01:123912414-123913949 (+)
GWHBCHF00000002
|
LXL04_025113
Chr05:106265215-106276500 (+)
CM104803.1
|
Many-to-one | non reciprocal best hit Complex |
67.900 Q 58.017 / T 10.986 |
TkA01G495180 | |
|
TkA02G472930
Chr02:120671977-120674663 (+)
GWHBCHF00000003
|
LXL04_025113
Chr05:106265215-106276500 (+)
CM104803.1
|
Many-to-one | non reciprocal best hit Complex |
66.500 Q 74.286 / T 12.059 |
TkA02G472930 | |
|
TkA02G609040
Chr02:157073298-157077377 (-)
GWHBCHF00000003
|
LXL04_025113
Chr05:106265215-106276500 (+)
CM104803.1
|
Many-to-one | non reciprocal best hit Complex |
41.000 Q 61.964 / T 22.432 |
TkA02G609040 | |
|
TkA06G456940
Chr06:112938739-112943092 (+)
GWHBCHF00000007
|
LXL04_025113
Chr05:106265215-106276500 (+)
CM104803.1
|
Many-to-one | non reciprocal best hit Complex |
70.400 Q 68.878 / T 15.176 |
TkA06G456940 | |
|
TkA07G086730
Chr07:22656179-22661443 (-)
GWHBCHF00000008
|
LXL04_025113
Chr05:106265215-106276500 (+)
CM104803.1
|
One-to-many | multi candidate from TK1151 Complex |
33.800 Q 88.488 / T 47.062 |
TkA07G086730 | |
|
TkA07G167880
Chr07:43059121-43061809 (+)
GWHBCHF00000008
|
LXL04_025113
Chr05:106265215-106276500 (+)
CM104803.1
|
Many-to-one | non reciprocal best hit Complex |
69.500 Q 70.234 / T 10.731 |
TkA07G167880 |
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