ID Crosswalk

Original TK1151 gene IDs are linked to OH-1004 gene-level counterparts. TK1151 and OH-1004 are different Taraxacum kok-saghyz materials, not two releases of the same cultivar. Complete crosswalk coverage does not mean every relationship is one-to-one; complex mappings require review of their category and evidence.

Version Sources

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Version	Assembly / Annotation Accession	Source Database	Publication	DOI / PMID	Download Date
TK1151 Taraxacum kok-saghyz	GWHBCHF00000000 GWHBCHF00000000 GFF/RNA/CDS/Protein	NGDC Genome Warehouse (GWH)	Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum Tao Lin, Xia Xu, Huilong Du, Xiuli Fan, Qingwen Chen, et al.; Science China Life Sciences; 2022	10.1007/s11427-021-2033-2 PMID: 34939160	2026-08-14
OH-1004 / OSU_TarKok_2.0 Taraxacum kok-saghyz	GCA_047496595.1 GCA_047496595.1_OSU_TarKok_2.0 GenBank GFF	NCBI Assembly / NGDC integrated NCBI Assembly	no linked publication found in NCBI/NGDC assembly records as of 2026-08-17 not available	not available	2026-08-14

Complete Gene ID Crosswalk

TK1151 reference: 45224 genes; 10 rows in the current filter. Showing page 1 / 1.

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Examples TkA01G624900 LXL04_000258

All Strict 1:1: 6347 Probable 1:1: 1703 One-to-many: 826 Many-to-one: 24458 Unmapped: 2782 Annotation conflict: 9108

Strict 1:1 requires RBH, high identity, query/target coverage, CDS support, and JCVI synteny. Probable 1:1 still requires RBH and coverage thresholds. Low-coverage, multi-hit, split/merged annotation, and unplaced-sequence cases are excluded from 1:1 conversion. Protein and CDS coverage each use the actual sequence span of the best-scoring single HSP divided by the corresponding representative sequence length; query is TK1151 and target is OH-1004. Protein, CDS, and transcript isoforms are not shown here.

TK1151 Gene ID	OH-1004 Gene ID	Category	Relationship / confidence	Identity / coverage	Description
TkA02G009980 Chr02:2182703-2185593 (+) GWHBCHF00000003	LXL04_022951 Chr05:14805488-14808933 (-) CM104803.1	Many-to-one	non reciprocal best hit Complex	77.300 Q 99.111 / T 83.515	TkA02G009980
TkA02G245950 Chr02:63190174-63192925 (-) GWHBCHF00000003	LXL04_022951 Chr05:14805488-14808933 (-) CM104803.1	Many-to-one	non reciprocal best hit Complex	78.200 Q 99.111 / T 83.515	TkA02G245950
TkA02G264350 Chr02:67705810-67708513 (-) GWHBCHF00000003	LXL04_022951 Chr05:14805488-14808933 (-) CM104803.1	Many-to-one	non reciprocal best hit Complex	82.500 Q 99.111 / T 83.515	TkA02G264350
TkA03G117430 Chr03:30030127-30032989 (-) GWHBCHF00000004	LXL04_022951 Chr05:14805488-14808933 (-) CM104803.1	Many-to-one	non reciprocal best hit Complex	78.600 Q 99.111 / T 83.515	TkA03G117430
TkA03G383160 Chr03:94615439-94618133 (+) GWHBCHF00000004	LXL04_022951 Chr05:14805488-14808933 (-) CM104803.1	Many-to-one	non reciprocal best hit Complex	82.500 Q 99.111 / T 83.515	TkA03G383160
TkA03G446820 Chr03:111448232-111450937 (-) GWHBCHF00000004	LXL04_022951 Chr05:14805488-14808933 (-) CM104803.1	Many-to-one	non reciprocal best hit Complex	81.900 Q 99.111 / T 83.515	TkA03G446820
TkA03G541090 Chr03:136265736-136268358 (+) GWHBCHF00000004	LXL04_022951 Chr05:14805488-14808933 (-) CM104803.1	Annotation conflict	RBH but below probable coverage or synteny threshold Review	89.500 Q 99.165 / T 77.138	TkA03G541090
TkA04G105880 Chr04:27557746-27560452 (+) GWHBCHF00000005	LXL04_022951 Chr05:14805488-14808933 (-) CM104803.1	Many-to-one	non reciprocal best hit Complex	82.500 Q 99.111 / T 83.515	TkA04G105880
TkA06G139670 Chr06:36597155-36599776 (+) GWHBCHF00000007	LXL04_022951 Chr05:14805488-14808933 (-) CM104803.1	Many-to-one	non reciprocal best hit Complex	82.300 Q 99.111 / T 83.515	TkA06G139670
TkA08G293280 Chr08:76023993-76025524 (-) GWHBCHF00000009	LXL04_022951 Chr05:14805488-14808933 (-) CM104803.1	Many-to-one	non reciprocal best hit Complex	84.600 Q 98.710 / T 47.123	TkA08G293280

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