query	query_gene_id	query_protein_id	source_reference	hit_rank	swissprot_acc	swissprot_entry	database_section	target_gene_id	description	organism	homolog_gene_name	percent_identity	alignment_length	query_coverage	evalue	bitscore	confidence	evidence_type	source_db	reference_gene_id	reference_function_zh	reference_function_en	reference_papers_json
LXL04_003350	gene-LXL04_003350	KAL4590421.1	OH-1004	1	C0SV12	JMJ29_ARATH	Swiss-Prot		Lysine-specific demethylase JMJ29 OS=Arabidopsis thaliana OX=3702 GN=JMJ29 PE=2 SV=1	Arabidopsis thaliana	JMJ29	46.747	661	73.796	0.0	603.0	moderate_database_homology	BLASTP to reviewed UniProt Swiss-Prot	UniProt Swiss-Prot current_release 2026-06-10	At1g62310	可能作为组蛋白H3赖氨酸去甲基化酶，参与基因表达调控。	May function as histone H3 lysine demethylase and be involved in regulation of gene expression.	[]
LXL04_003350	gene-LXL04_003350	KAL4590421.1	OH-1004	2	C0SUU8	JMJ26_ARATH	Swiss-Prot		Lysine-specific demethylase JMJ26 OS=Arabidopsis thaliana OX=3702 GN=JMJ26 PE=2 SV=1	Arabidopsis thaliana	JMJ26	45.934	664	73.908	0.0	595.0	moderate_database_homology	BLASTP to reviewed UniProt Swiss-Prot	UniProt Swiss-Prot current_release 2026-06-10	At1g11950	可能作为组蛋白H3赖氨酸去甲基化酶，参与基因表达调控。	May function as histone H3 lysine demethylase and be involved in regulation of gene expression.	[]
LXL04_003350	gene-LXL04_003350	KAL4590421.1	OH-1004	3	Q8VYB9	JMJ27_ARATH	Swiss-Prot		Lysine-specific demethylase JMJ27 OS=Arabidopsis thaliana OX=3702 GN=JMJ27 PE=1 SV=1	Arabidopsis thaliana	JMJ27	42.956	724	74.58	6.87e-175	530.0	moderate_database_homology	BLASTP to reviewed UniProt Swiss-Prot	UniProt Swiss-Prot current_release 2026-06-10	At4g00990	组蛋白去甲基酶，可去甲基化组蛋白H3的'Lys-9'(H3K9me)，对H3K9me1和H3K9me2具有特异性活性。	Histone demethylase that demethylates 'Lys-9' (H3K9me) of histone H3 with a specific activity for H3K9me1 and H3K9me2.	"[{""pmid"":""28650521"",""title"":""JMJ27, an Arabidopsis H3K9 histone demethylase, modulates defense against Pseudomonas syringae and flowering time."",""doi"":""10.1111/tpj.13623"",""url"":""https://pubmed.ncbi.nlm.nih.gov/28650521/"",""year"":""2017"",""journal"":""The Plant journal : for cell and molecular biology"",""authors"":""Dutta A; Choudhary P; Caruana J; Raina R"",""matched_aliases"":[""JMJ27""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""34197643"",""title"":""JMJ27-mediated histone H3K9 demethylation positively regulates drought-stress responses in Arabidopsis."",""doi"":""10.1111/nph.17593"",""url"":""https://pubmed.ncbi.nlm.nih.gov/34197643/"",""year"":""2021"",""journal"":""The New phytologist"",""authors"":""Wang Q; Liu P; Jing H; Zhou XF; Zhao B; Li Y; Jin JB"",""matched_aliases"":[""JMJ27""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false}]"
LXL04_003350	gene-LXL04_003350	KAL4590421.1	OH-1004	4	Q9SSE9	JMJ25_ARATH	Swiss-Prot		Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana OX=3702 GN=JMJ25 PE=1 SV=1	Arabidopsis thaliana	JMJ25	53.348	448	49.496	7.5e-145	458.0	weak_database_homology	BLASTP to reviewed UniProt Swiss-Prot	UniProt Swiss-Prot current_release 2026-06-10	At3g07610	组蛋白去甲基酶，去甲基化组蛋白 H3 的 'Lys-9' (H3K9me)，特别针对 H3K9me2 和 H3K9me1。	Histone demethylase that demethylates 'Lys-9' (H3K9me) of histone H3 with a specific activity for H3K9me2 and H3K9me1.	"[{""pmid"":""18218897"",""title"":""Control of genic DNA methylation by a jmjC domain-containing protein in Arabidopsis thaliana."",""doi"":""10.1126/science.1150987"",""url"":""https://pubmed.ncbi.nlm.nih.gov/18218897/"",""year"":""2008"",""journal"":""Science (New York, N.Y.)"",""authors"":""Saze H; Shiraishi A; Miura A; Kakutani T"",""matched_aliases"":[""IBM1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""19262562"",""title"":""An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites."",""doi"":""10.1038/emboj.2009.59"",""url"":""https://pubmed.ncbi.nlm.nih.gov/19262562/"",""year"":""2009"",""journal"":""The EMBO journal"",""authors"":""Miura A; Nakamura M; Inagaki S; Kobayashi A; Saze H; Kakutani T"",""matched_aliases"":[""IBM1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""20834229"",""title"":""Autocatalytic differentiation of epigenetic modifications within the Arabidopsis genome."",""doi"":""10.1038/emboj.2010.227"",""url"":""https://pubmed.ncbi.nlm.nih.gov/20834229/"",""year"":""2010"",""journal"":""The EMBO journal"",""authors"":""Inagaki S; Miura-Kamio A; Nakamura Y; Lu F; Cui X; Cao X; Kimura H; Saze H; Kakutani T"",""matched_aliases"":[""IBM1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""22580822"",""title"":""DNA methylation in an intron of the IBM1 histone demethylase gene stabilizes chromatin modification patterns."",""doi"":""10.1038/emboj.2012.141"",""url"":""https://pubmed.ncbi.nlm.nih.gov/22580822/"",""year"":""2012"",""journal"":""The EMBO journal"",""authors"":""Rigal M; Kevei Z; Pélissier T; Mathieu O"",""matched_aliases"":[""IBM1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""22772985"",""title"":""IBM1, a JmjC domain-containing histone demethylase, is involved in the regulation of RNA-directed DNA methylation through the epigenetic control of RDR2 and DCL3 expression in Arabidopsis."",""doi"":""10.1093/nar/gks647"",""url"":""https://pubmed.ncbi.nlm.nih.gov/22772985/"",""year"":""2012"",""journal"":""Nucleic acids research"",""authors"":""Fan D; Dai Y; Wang X; Wang Z; He H; Yang H; Cao Y; Deng XW; Ma L"",""matched_aliases"":[""IBM1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""24404182"",""title"":""SHOOT GROWTH1 maintains Arabidopsis epigenomes by regulating IBM1."",""doi"":""10.1371/journal.pone.0084687"",""url"":""https://pubmed.ncbi.nlm.nih.gov/24404182/"",""year"":""2014"",""journal"":""PloS one"",""authors"":""Coustham V, Vlad D, Deremetz A, Gy I, Cubillos FA, Kerdaffrec E, Loudet O, Bouché N."",""matched_aliases"":[""IBM1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""27697902"",""title"":""Demethylation of ERECTA receptor genes by IBM1 histone demethylase affects stomatal development."",""doi"":""10.1242/dev.129932"",""url"":""https://pubmed.ncbi.nlm.nih.gov/27697902/"",""year"":""2016"",""journal"":""Development (Cambridge, England)"",""authors"":""Wang Y; Xue X; Zhu JK; Dong J"",""matched_aliases"":[""IBM1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""33986281"",""title"":""Contrasting epigenetic control of transgenes and endogenous genes promotes post-transcriptional transgene silencing in Arabidopsis."",""doi"":""10.1038/s41467-021-22995-3"",""url"":""https://pubmed.ncbi.nlm.nih.gov/33986281/"",""year"":""2021"",""journal"":""Nature communications"",""authors"":""Butel N, Yu A, Le Masson I, Borges F, Elmayan T, Taochy C, Gursanscky NR, Cao J, Bi S, Sawyer A, Carroll BJ, Vaucheret H."",""matched_aliases"":[""IBM1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""41036628"",""title"":""The arabidopsis GyraseB3 contributes to transposon silencing by promoting histone deacetylation."",""doi"":""10.1093/nar/gkaf985"",""url"":""https://pubmed.ncbi.nlm.nih.gov/41036628/"",""year"":""2025"",""journal"":""Nucleic acids research"",""authors"":""Gy I; Beaubiat S; Bouché N"",""matched_aliases"":[""IBM1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false}]"
LXL04_003350	gene-LXL04_003350	KAL4590421.1	OH-1004	6	F4HZD1	JMJ24_ARATH	Swiss-Prot		E3 ubiquitin-protein ligase JMJ24 OS=Arabidopsis thaliana OX=3702 GN=JMJ24 PE=1 SV=1	Arabidopsis thaliana	JMJ24	33.045	693	75.028	8.59e-116	379.0	moderate_database_homology	BLASTP to reviewed UniProt Swiss-Prot	UniProt Swiss-Prot current_release 2026-06-10	At1g09060	可能结合组蛋白 H3，但因无法结合 Fe²⁺ 而丧失去甲基化酶活性。	May bind histone H3 but appears to lack demethylase activity because it cannot bind Fe²⁺.	"[{""pmid"":""26119694"",""title"":""JMJ24 binds to RDR2 and is required for the basal level transcription of silenced loci in Arabidopsis."",""doi"":""10.1111/tpj.12924"",""url"":""https://pubmed.ncbi.nlm.nih.gov/26119694/"",""year"":""2015"",""journal"":""The Plant journal : for cell and molecular biology"",""authors"":""Deng S, Xu J, Liu J, Kim SH, Shi S, Chua NH."",""matched_aliases"":[""JMJ24""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""26798133"",""title"":""JMJ24 targets CHROMOMETHYLASE3 for proteasomal degradation in Arabidopsis."",""doi"":""10.1101/gad.274647.115"",""url"":""https://pubmed.ncbi.nlm.nih.gov/26798133/"",""year"":""2016"",""journal"":""Genes & development"",""authors"":""Deng S, Jang IC, Su L, Xu J, Chua NH."",""matched_aliases"":[""JMJ24""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""26979329"",""title"":""A JUMONJI Protein with E3 Ligase and Histone H3 Binding Activities Affects Transposon Silencing in Arabidopsis."",""doi"":""10.1104/pp.15.01688"",""url"":""https://pubmed.ncbi.nlm.nih.gov/26979329/"",""year"":""2016"",""journal"":""Plant physiology"",""authors"":""Kabelitz T, Brzezinka K, Friedrich T, Górka M, Graf A, Kappel C, Bäurle I."",""matched_aliases"":[""JMJ24""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false}]"