Gene Card
Gene overview
cDNA / CDS / Protein Sequences
354 bp · TkAUNG030860|TK1151|cDNA
GAAGGAAATGTTGAAGGTTTAAATGATGGTGAAACAATTATAGATATTCTTGACGATCTTCTCAATACAGATTTGTTTGATCCTATTAGTTATTTAATTGAGTTTGTCTATCCTTCTATTGTTCAAAGTGAGAATAATCTCAATTTCTTCCAAGAAAGAGCAATCCTCACCCTAAAGAATGAAGTTGTTCAAGAAATTAATGATTGTTTGTTATCGCTATTCGTTGGAGATGAAAATGAATACTTAAGTTCAGACAGCTT...
354 bp · TkAUNG030860|TK1151|CDS
GAAGGAAATGTTGAAGGTTTAAATGATGGTGAAACAATTATAGATATTCTTGACGATCTTCTCAATACAGATTTGTTTGATCCTATTAGTTATTTAATTGAGTTTGTCTATCCTTCTATTGTTCAAAGTGAGAATAATCTCAATTTCTTCCAAGAAAGAGCAATCCTCACCCTAAAGAATGAAGTTGTTCAAGAAATTAATGATTGTTTGTTATCGCTATTCGTTGGAGATGAAAATGAATACTTAAGTTCAGACAGCTT...
Protein
Download Protein FASTA117 aa · TkAUNG030860|TK1151|PROTEIN
EGNVEGLNDGETIIDILDDLLNTDLFDPISYLIEFVYPSIVQSENNLNFFQERAILTLKNEVVQEINDCLLSLFVGDENEYLSSDSLCHLEEPVFTHGQLYVALSEVKSRRWIKLNY
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkAUNG030860 |
|---|---|
| TK1151 ID | TkAUNG030860 |
| OH-1004 ID | LXL04_027590 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 78.700 |
| Protein coverage (%) | TK1151 76.068 / OH-1004 24.384Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkAUNG030860 |
|---|---|
| Location | ChrUn:8290921-8291496 (+) |
| Description | Similar to Pif1: ATP-dependent DNA helicase PIF1 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0000723 telomere maintenance Biological Process GO:0001117 protein-DNA-RNA complex disassembly Biological Process GO:0006281 DNA repair Biological Process GO:0006310 DNA recombination Biological Process GO:0007004 telomere maintenance via telomerase Biological Process GO:0032211 negative regulation of telomere maintenance via telomerase Biological Process GO:0000781 chromosome, telomeric region Cellular Component GO:0005634 nucleus Cellular Component GO:0005654 nucleoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0042645 mitochondrial nucleoid Cellular Component GO:0000287 magnesium ion binding Molecular Function |
| KEGG gene cross-reference | hsa:80119 mmu:208084 rno:367645 xla:734585 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.