TkA08G126780 | RubberDandelionOmics

Gene overview

TkA08G126780

Reference: TK1151 Chr: Chr08 Coordinates: 32966734-32967159 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

426 bp · TkA08G126780|TK1151|cDNA

ATGTATCCAGCTGGACCTCTACTTCCTCATGAGTCGTCAAAGGATTGCATGGTTAGCGGGTATCATGTCCCACGTGGAACAATGTTGTTAGTGAATGCATGGGGAATACAAAACGACCCAAATATTTGGGAGAATCCTGAAGAATTTAGGCCGGAAAGGTTTGAAGGGGTAGAAGGTTATGGTGACGATGGGTTCAAGTTATTGCCGTTTGGGTTTGGGATGAGGAGTTGTCCCGGAGAAAATATGGAGTTGAGAATGGT...

CDS

Download CDS FASTA

426 bp · TkA08G126780|TK1151|CDS

ATGTATCCAGCTGGACCTCTACTTCCTCATGAGTCGTCAAAGGATTGCATGGTTAGCGGGTATCATGTCCCACGTGGAACAATGTTGTTAGTGAATGCATGGGGAATACAAAACGACCCAAATATTTGGGAGAATCCTGAAGAATTTAGGCCGGAAAGGTTTGAAGGGGTAGAAGGTTATGGTGACGATGGGTTCAAGTTATTGCCGTTTGGGTTTGGGATGAGGAGTTGTCCCGGAGAAAATATGGAGTTGAGAATGGT...

Protein

Download Protein FASTA

141 aa · TkA08G126780|TK1151|PROTEIN

MYPAGPLLPHESSKDCMVSGYHVPRGTMLLVNAWGIQNDPNIWENPEEFRPERFEGVEGYGDDGFKLLPFGFGMRSCPGENMELRMVGMALGSLVQCFQWERISESKVDMNEGNGISMPMAIHLVAISQPRPIMLNLLSQL

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

ID Mapping

Input ID	`TkA08G126780`
TK1151 ID	TkA08G126780
OH-1004 ID	LXL04_031735
Relationship / confidence	Rbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)	93.700
Protein coverage (%)	TK1151 90.071 / OH-1004 48.289 Coverage and evidence Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.
Source version	TK1151 / GWHBCHF00000000

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SNP / Indel variants and carrier samplesCRA009020 · TK1151

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Basic Information and Functional Annotation

Gene ID TkA08G126780

Location Chr08:32966734-32967159 (-)

Description Similar to CYP81D1: Cytochrome P450 81D1

Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g36220`	Cytochrome P450 81D1.	No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source

View annotation sources

Functional annotation source: OH1004 · LXL04_031735 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)

GO:0002213 defense response to insect Biological Process

GO:0005789 endoplasmic reticulum membrane Cellular Component

GO:0009507 chloroplast Cellular Component

GO:0016020 membrane Cellular Component

GO:0004497 monooxygenase activity Molecular Function

GO:0005506 iron ion binding Molecular Function

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Molecular Function

GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen Molecular Function

GO:0020037 heme binding Molecular Function

GO:0102915 piperitol synthase activity Molecular Function

KEGG gene cross-reference

ag:BAE48235

ath:AT3G28740

ath:AT5G36220

sind:105177765

These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

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Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Endoplasmic reticulum0.407

Rank 1 · TkA08G126780 · TK1151

Peroxisome0.124

Rank 2 · TkA08G126780 · TK1151

Mitochondrion0.076

Rank 3 · TkA08G126780 · TK1151

Plastid0.060

Rank 4 · TkA08G126780 · TK1151

Cytoplasm0.056

Rank 5 · TkA08G126780 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00067p4501-119 aa

Gene ID	Domain ID	Domain Name	Start aa	End aa	E-value	Score
TkA08G126780	`PF00067`	p450	1	119	5.5e-33	115.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

Protein	Organism	Description	Identity	Database	Confidence
`Q9FG65`	Arabidopsis thaliana	sp\|Q9FG65\|C81D1_ARATH Cytochrome P450 81D1	52.100%	Swiss-Prot	High

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