Gene Card
Gene overview
cDNA / CDS / Protein Sequences
731 bp · TkA06G195430|TK1151|cDNA
CATCTAGGAACGGCTGAAGAGGAAAAGGACGGAGAATATGTGGTTTGTAAGTTATTTTATCATCCTAAAAAGCATTCAGACAATACCAGCATTGAACATTCAGACGCATCAGTGAGTCTTACCAGTCCTAGGACACCAAAACTCAACGATCCTCATCCACCACGCCCAAGAACCTCCCATACGTATCAAGATGTTACCGCTGATTATGCTCTTCAATCACCATCGCAGGAATCAAAATGTTTCGACGACAATAAGTACCT...
453 bp · TkA06G195430|TK1151|CDS
CATCTAGGAACGGCTGAAGAGGAAAAGGACGGAGAATATGTGGTTTGTAAGTTATTTTATCATCCTAAAAAGCATTCAGACAATACCAGCATTGAACATTCAGACGCATCAGTGAGTCTTACCAGTCCTAGGACACCAAAACTCAACGATCCTCATCCACCACGCCCAAGAACCTCCCATACGTATCAAGATGTTACCGCTGATTATGCTCTTCAATCACCATCGCAGGAATCAAAATGTTTCGACGACAATAAGTACCT...
Protein
Download Protein FASTA150 aa · TkA06G195430|TK1151|PROTEIN
HLGTAEEEKDGEYVVCKLFYHPKKHSDNTSIEHSDASVSLTSPRTPKLNDPHPPRPRTSHTYQDVTADYALQSPSQESKCFDDNKYLPAFSTHKVKDDGKGGKCKDETYGLGATGGMSLDHLDLDSPLDFNLSELYFPSEDSVCDRLNWL
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA06G195430 |
|---|---|
| TK1151 ID | TkA06G195430 |
| OH-1004 ID | LXL04_023912 |
| Relationship / confidence | Sequence Supported Annotation Or Model Conflict / Review |
| Protein identity (%) | 98.700 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 41.737Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA06G195430 |
|---|---|
| Location | Chr06:50904750-50908062 (+) |
| Description | Similar to SOG1: SUPPRESSOR OF GAMMA RESPONSE 1 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0000077 DNA damage checkpoint signaling Biological Process GO:0006351 DNA-templated transcription Biological Process GO:0006355 regulation of DNA-templated transcription Biological Process GO:0010321 regulation of vegetative phase change Biological Process GO:0010332 response to gamma radiation Biological Process GO:0040020 regulation of meiotic nuclear division Biological Process GO:0045893 positive regulation of DNA-templated transcription Biological Process GO:0071555 cell wall organization Biological Process GO:1905177 tracheary element differentiation Biological Process GO:2000652 regulation of secondary cell wall biogenesis Biological Process GO:0005634 nucleus Cellular Component GO:0016020 membrane Cellular Component |
| KEGG gene cross-reference | ath:AT1G25580 ath:AT1G28470 ath:AT1G33060 ath:AT4G28500 ath:AT4G29230 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.