Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1788 bp · LXL04_017495|LXL04_017495|OH1004|cDNA
ATGCCTGAGAAATCTCATCGTGATACTGGAAAAGCTTTGCAGTCCATTGAAGCTCACCAATCTGCATGGTTCACACATTGGACAGGAACAAGATTTGAATCAAGCACACATGATCCTTCACCACACCTTACTCGAAACGAAGAAGATGATCATGATATAAAAAAACACCGGAATAAAGTAGAAACAGCATCTGATAACTTTGGATCTTCAAAAGATTTGGAACTAGCAATGAGCTTAAAGAAACCTGATACTCCATCTTT...
1788 bp · LXL04_017495|LXL04_017495|OH1004|CDS
ATGCCTGAGAAATCTCATCGTGATACTGGAAAAGCTTTGCAGTCCATTGAAGCTCACCAATCTGCATGGTTCACACATTGGACAGGAACAAGATTTGAATCAAGCACACATGATCCTTCACCACACCTTACTCGAAACGAAGAAGATGATCATGATATAAAAAAACACCGGAATAAAGTAGAAACAGCATCTGATAACTTTGGATCTTCAAAAGATTTGGAACTAGCAATGAGCTTAAAGAAACCTGATACTCCATCTTT...
Protein
Download Protein FASTA595 aa · LXL04_017495|LXL04_017495|OH1004|PROTEIN
MPEKSHRDTGKALQSIEAHQSAWFTHWTGTRFESSTHDPSPHLTRNEEDDHDIKKHRNKVETASDNFGSSKDLELAMSLKKPDTPSFPFFKRGQESAVRNLIPNEELQALGPQFSHKKPSTDLNIGSSSKECHFQTEEVSQVPSEQVKYHMFFGETHTTTHLPKTKSVAMEQEHKMPSFFRQDNVTLLKNNHPSTSTNSLPSLIEEQYKRMQKHIGMGFFPHQTGCPEMIKPGTVQSFHNGLHSFSRTTHSLLITKQTDV...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_017495 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_017495 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr03:151858292-151860812 (+) | |||||||||
| Description | Similar to At2g16365: F-box protein At2g16365 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0007623 circadian rhythm Biological Process GO:0009637 response to blue light Biological Process GO:0009658 chloroplast organization Biological Process GO:0010017 red or far-red light signaling pathway Biological Process GO:0010099 regulation of photomorphogenesis Biological Process GO:0010114 response to red light Biological Process GO:0010218 response to far red light Biological Process GO:0045893 positive regulation of DNA-templated transcription Biological Process GO:0090227 regulation of red or far-red light signaling pathway Biological Process GO:0005634 nucleus Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT2G16365 ath:AT4G34550 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.