dataset_layer rows scope_zh scope_en role reference method distinct_genes status tk1151_tf_catalog 1701 活动 TF 页面使用的家族候选分配；记录与基因分别计数 Family assignments used by the active TF page; records and genes counted separately active TK1151 Pfam family rules 1667 ready tk1151_motif_transfer 1941 覆盖率已按残基端点重算；同源候选不是直接结合验证 Coverage recomputed from residue endpoints; homology candidates are not direct binding validation active TK1151 BLAST residue-coordinate coverage 786 ready tk1151_specific_tf_motif 3725 具体 TF 与 motif 关联的活动查询来源 Active source for specific TF-to-motif associations active TK1151 Motif-specific homology 951 ready locpro_oh1004 195460 预测记录可能含多个位置，基因数不等于记录数 Multiple locations can occur per protein; gene count differs from record count active OH1004 LocPro 39092 ready locpro_tk1151 226045 预测记录可能含多个位置，基因数不等于记录数 Multiple locations can occur per protein; gene count differs from record count active TK1151 LocPro 45209 ready active_coexpression_cache 216000 每个查询、每个数据集缓存前 200 名；使用各数据集参考和单位；TK1151 StringTie 临时 STRG 与歧义记录已隔离 Top 200 per query per dataset; references and units are dataset-specific; sample-local STRG and ambiguous TK1151 StringTie records are excluded active dataset-specific Pearson correlation ready candidate_network_coexpression_predicted 257434 层内去重基因数；证据层之间不能相加计为独立互作。pending 是候选任务，尚无完成的结构模型。 Distinct genes within this layer; layers must not be summed as independent interactions. Pending denotes proposed tasks, not completed structural models. active TK1151 official-ID mapped coexpression_predicted 20082 computed candidate_network_domain_compatibility_predicted 660897 层内去重基因数；证据层之间不能相加计为独立互作。pending 是候选任务，尚无完成的结构模型。 Distinct genes within this layer; layers must not be summed as independent interactions. Pending denotes proposed tasks, not completed structural models. active TK1151 official-ID mapped domain_compatibility_predicted 3077 computed candidate_network_orthology_transferred 140185 层内去重基因数；证据层之间不能相加计为独立互作。pending 是候选任务，尚无完成的结构模型。 Distinct genes within this layer; layers must not be summed as independent interactions. Pending denotes proposed tasks, not completed structural models. active TK1151 official-ID mapped orthology_transferred 9905 computed candidate_network_pathway_co_membership 20000 层内去重基因数；证据层之间不能相加计为独立互作。pending 是候选任务，尚无完成的结构模型。 Distinct genes within this layer; layers must not be summed as independent interactions. Pending denotes proposed tasks, not completed structural models. active TK1151 official-ID mapped pathway_co_membership 3961 computed candidate_network_rubber_biosynthesis_co_membership 1666 层内去重基因数；证据层之间不能相加计为独立互作。pending 是候选任务，尚无完成的结构模型。 Distinct genes within this layer; layers must not be summed as independent interactions. Pending denotes proposed tasks, not completed structural models. active TK1151 official-ID mapped rubber_biosynthesis_co_membership 99 computed candidate_network_structure_prediction 50 层内去重基因数；证据层之间不能相加计为独立互作。pending 是候选任务，尚无完成的结构模型。 Distinct genes within this layer; layers must not be summed as independent interactions. Pending denotes proposed tasks, not completed structural models. active TK1151 official-ID mapped structure_prediction 45 pending candidate_network_subcellular_compatibility 416477 层内去重基因数；证据层之间不能相加计为独立互作。pending 是候选任务，尚无完成的结构模型。 Distinct genes within this layer; layers must not be summed as independent interactions. Pending denotes proposed tasks, not completed structural models. active TK1151 official-ID mapped subcellular_compatibility 20643 computed core_gene 39103 OSU_TarKok_2.0 核心基因坐标与别名解析 OSU_TarKok_2.0 core genes and aliases active See scope See scope ready id_alias 78206 全站统一 ID/别名解析 Site-wide ID and alias resolver active See scope See scope ready function_description 39103 GFF 与同源转移整合的基因功能描述 GFF and homology-transfer gene descriptions active See scope See scope ready GO_annotation 335702 Swiss-Prot 证据转移 GO 注释 Swiss-Prot transferred GO annotation active See scope See scope ready KEGG_annotation 86325 Swiss-Prot 证据转移 KEGG/KO 注释 Swiss-Prot transferred KEGG/KO annotation active See scope See scope ready rubber_biosynthesis 5523 天然橡胶、MVA/MEP、异戊二烯与萜类候选基因 Natural rubber, MVA/MEP, isoprenoid and terpene candidates active See scope See scope ready expression_atlas 37578919 独立统一模型 v4：109 样本、98,473 固定 TKU 基因，TPM/FPKM/Coverage 分开发布；OH1004 与文献原始数据独立保留，旧 TK1151 值已隔离，禁止回填。 Isolated uniform v4: 109 runs, 98,473 fixed TKU loci, separate TPM/FPKM/Coverage; independent OH1004 and publication layers retained; legacy TK1151 values quarantined with no fallback. active See scope See scope ready expression_sample 578 样品元数据目录；部分记录缺少表达单位或完整实验设计，须查看具体数据集 Sample metadata catalogue; some records lack expression units or complete study design, so inspect each dataset active See scope See scope ready tissue_expression_FPKM 51844 自育品系昭苏的 8 类组织、各 3 个样本基因 FPKM；采样阶段与公共库登录号未提供 Gene FPKM from the in-house bred Zhaosu line across 8 tissues with 3 samples each; collection stage and public archive accession were not supplied active See scope See scope ready PMID30514210_expression 46749 已发表补充表的 contig 级 RPKM 矩阵 Published supplement contig-level RPKM matrix active See scope See scope ready proteome 9040 PXD011773 蛋白组证据表 PXD011773 proteome evidence table active See scope See scope ready homology 121540 Swiss-Prot DIAMOND/BLASTP 同源命中 Swiss-Prot DIAMOND/BLASTP homolog hits active See scope See scope ready domain_pfam 71718 Pfam-A hmmscan 显著结构域 Pfam-A hmmscan significant domains active See scope See scope ready subcellular 20082 辅助/历史来源层，非活动模块的完整覆盖统计；Swiss-Prot 同源转移亚细胞定位候选 Auxiliary/historical source layer, not complete coverage of the active module; Swiss-Prot homology-transferred subcellular candidates source See scope Source layer ready tf_prediction 313 辅助/历史来源层，非活动模块的完整覆盖统计；保守 Pfam 结构域 TF 家族候选 Auxiliary/historical source layer, not complete coverage of the active module; Conservative Pfam-domain TF family candidates source See scope Source layer ready ppi_association 500000 辅助/历史来源层，非活动模块的完整覆盖统计；Arabidopsis STRING 同源转移蛋白关联候选 Auxiliary/historical source layer, not complete coverage of the active module; Arabidopsis STRING homology-transferred protein associations source See scope Source layer ready coexpression 736025 辅助/历史来源层，非活动模块的完整覆盖统计；PRJNA745038 表达矩阵预计算共表达边 Auxiliary/historical source layer, not complete coverage of the active module; Precomputed PRJNA745038 coexpression edges source See scope Source layer ready reference_gene_catalog 85281 TK1151 与 OH-1004 GFF 基因目录 TK1151 and OH-1004 GFF gene catalogs active See scope See scope ready id_converter_map 84884 TK1151-OH1004 基因级 RBH ID 对照记录 TK1151-OH1004 gene-level RBH ID-mapping records active See scope See scope ready synteny_block 427 TK1151-OH1004 坐标锚点共线性区块；与 ID 对照记录分开计数 TK1151-OH1004 coordinate-anchor synteny blocks; counted separately from ID-mapping records active See scope See scope ready resequencing_CRA009020 129 GSA CRA009020 的 129 个配对 WGS Run 元数据、MD5 与 GSA 官方直链；本站不镜像原始 FASTQ Metadata, MD5 values, and official GSA links for 129 paired WGS runs in CRA009020; raw FASTQ files are not mirrored locally active See scope See scope ready gene_variants_CRA009020 — CRA009020 的 OH1004/TK1151 双参考基因体内 PASS SNP/Indel 候选，129 样本；按基因检索，全库记录数未实时扫描，两套参考不能合并计为独立位点 Gene-body PASS SNP/Indel candidates for OH1004 and TK1151 from 129 CRA009020 samples; query by gene, as a live full-table count is not performed and the two references cannot be summed as distinct loci active See scope See scope ready